KEGG   Trematomus bernacchii (emerald rockcod): 117486829
Entry
117486829         CDS       T09643                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03013  Nucleocytoplasmic transport
tben04141  Protein processing in endoplasmic reticulum
tben04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117486829 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117486829 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    117486829 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117486829 (sec13)
   04131 Membrane trafficking [BR:tben04131]
    117486829 (sec13)
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117486829 (sec13)
Membrane trafficking [BR:tben04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    117486829 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    117486829 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    117486829 (sec13)
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 117486829
NCBI-ProteinID: XP_033991289
EnsemblRapid: ENSTBNG00005003577
LinkDB
Position
Unknown
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKMFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGSWDKMHEYCGHESSVNSVCWGPYDFGLIL
ACGSSDGAISILTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgttatcaacacggtggacacctctcatgaggatatgatccacgatgcccag
atggattactacgggactcgcctcgccacctgctcctcggaccgcaccgtgaagatgttc
gacgtcagaaacggaggacagatcctggtggctgacctcagaggccacgagggtccggtg
tggcaggtggcctgggctcaccccatgttcggaaacatcctggcttcctgttcctacgac
cgtaaagtcatcatctggaaggaggagaacggcagctgggacaagatgcacgagtactgc
ggacacgagtcatcagtgaactctgtgtgttggggtccctatgacttcggtctgattctg
gcctgtggcagctcggacggagccatttctatcctcactttcaccggagatcagcagtgg
gacgtcaagaagatcagcaacgcacacactatcggctgtaacgcggtgagctgggctccg
gctgtggttcctggcagtttgatcgatcagccgtcgggacagaaaccaaactacgtcaaa
cgcttcgtctccggaggctgcgacaacctcgtcaaactctggaaagaggaggacggtcag
tggaaggaggaccagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccgtccatcgggctgcccaccagcaccatcgccagctgctcccaggacggacgcgtgttc
atctggacgtgtgacgacccggctggaaacacctggacggctaaactcctccacaagttc
aacgatgtggtttggcacgtcagctggtccataaccggaaacatcctggctgtttcagga
ggagacaacaaggtgacgctgtggaaggagtcgatggacgggcagtgggcctgcatcagt
gacgtcagcaaaggacaaggagccgtctccaccatcacagacacacagcagagcgagcag
tga

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