Trematomus bernacchii (emerald rockcod): 117486829
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Entry
117486829 CDS
T09643
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
tben04141
Protein processing in endoplasmic reticulum
tben04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117486829 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117486829 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117486829 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117486829 (sec13)
04131 Membrane trafficking [BR:
tben04131
]
117486829 (sec13)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117486829 (sec13)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117486829 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117486829 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
117486829 (sec13)
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
117486829
NCBI-ProteinID:
XP_033991289
EnsemblRapid:
ENSTBNG00005003577
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKMFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGSWDKMHEYCGHESSVNSVCWGPYDFGLIL
ACGSSDGAISILTFTGDQQWDVKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQSEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgttatcaacacggtggacacctctcatgaggatatgatccacgatgcccag
atggattactacgggactcgcctcgccacctgctcctcggaccgcaccgtgaagatgttc
gacgtcagaaacggaggacagatcctggtggctgacctcagaggccacgagggtccggtg
tggcaggtggcctgggctcaccccatgttcggaaacatcctggcttcctgttcctacgac
cgtaaagtcatcatctggaaggaggagaacggcagctgggacaagatgcacgagtactgc
ggacacgagtcatcagtgaactctgtgtgttggggtccctatgacttcggtctgattctg
gcctgtggcagctcggacggagccatttctatcctcactttcaccggagatcagcagtgg
gacgtcaagaagatcagcaacgcacacactatcggctgtaacgcggtgagctgggctccg
gctgtggttcctggcagtttgatcgatcagccgtcgggacagaaaccaaactacgtcaaa
cgcttcgtctccggaggctgcgacaacctcgtcaaactctggaaagaggaggacggtcag
tggaaggaggaccagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccgtccatcgggctgcccaccagcaccatcgccagctgctcccaggacggacgcgtgttc
atctggacgtgtgacgacccggctggaaacacctggacggctaaactcctccacaagttc
aacgatgtggtttggcacgtcagctggtccataaccggaaacatcctggctgtttcagga
ggagacaacaaggtgacgctgtggaaggagtcgatggacgggcagtgggcctgcatcagt
gacgtcagcaaaggacaaggagccgtctccaccatcacagacacacagcagagcgagcag
tga
DBGET
integrated database retrieval system