KEGG   Trematomus bernacchii (emerald rockcod): 117486830
Entry
117486830         CDS       T09643                                 
Symbol
cand2
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-associated NEDD8-dissociated protein 2
  KO
K24172  cullin-associated NEDD8-dissociated protein 2
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117486830 (cand2)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117486830 (cand2)
SSDB
Motif
Pfam: TIP120 HEAT_EF3_N TOR1L1_N HEAT_2 HEAT_EZ UME HEAT HEAT_ECM29 GNC1_N MMS19_C Adaptin_N Cnd1 HEAT_DAAF5 UTP20_N PDS5 VHS GlcNAc_2-epim DUF6077
Other DBs
NCBI-GeneID: 117486830
NCBI-ProteinID: XP_033991291
LinkDB
Position
Unknown
AA seq 1237 aa
MSSVSYYISNLLEKMTSTDKDFRFMATNDLMLELQKDSIKLDEDSERKVVTMLLKLLEDK
NGEVQNLAVKCLAPLVSKVKEPQVEVMVDTLCSNMMSDKEPLRDISSMGLKTVIAELPLT
STGLTLTVGVCKKITSQLIGAMGKQEDVSVQLEALDILSDMLGRLSGALVSFHSALLSSL
LPQLTSSRMAVRKRSILALGHLVPCCSPALFSQLTEHLTNELAKAPPVSMARTYIQCLAT
VSRQGGHRVGEHLEKLIPMVLKFTDVEDDELREYCFQAFEAFIRSCPKEMSPHVATVTKL
CLKFMTFDPNYNYDDEEEEEDSMDVEEGLEEESDDEYSDDDDMSWKVRRSSIKCLESLIA
TRRDLLLSFFSSVCPALLARFKEREENVRADVFSAFSSLLRQTRGGTSLQGNMRPGGEEP
ALTLLKTQVPLIVKALHRQLKEKSIRSRQGCFSLLSELSHTAPGALETHIPALIPGIVFS
LTDRSSSSTMRIDALSFLHVLLLSHPPEAFQPHMQVLLPPVVSCVEDSFYKITSEALLVV
LQLVRVMRPQGPSAGGGFDPKPFVREVFSVTLKRLKATDIDQEVKERAISCMGHMVCHLG
DHLGAELQGVLAIFLERLKNEITRLTAVRTLTLVSASLLKIDLSSILPETLSVLGSFLRK
NERVLKLGTLACLTSIIMHQAANIKPAALEPVLSELPGLVDESDMHVSQVSVSLLSVMAR
SCPSSLNRISLSVLPCVFRLVLSPLLQGAALSSILDLLQALVLSNTSNMGYSQLLKSLTD
PFHLPSSSSSSSSPLIHRQSYLSVSRCVAALSSSCPKETPSTVNGLLQEVKNPGSPESAR
VLALLCLGEVGRSGSLGGRKEVLGVILEAISSTNEEVRTAASCALGSMAVGSLNDYLPFL
LTEISTQPRRQYLLLNSLKEVISACPASSLSPHVESIWSLLFQHCECPEEGTRNLVAECL
GKLTLVNAAQLLPRLKQQLRAGSPLARSTVVTAVKFTIVDHPAPIDALLKDCIGDFLQTL
QDDDLNVRRVSLVMFNSAAHNKPSLIRGLLATVLPHLYRETQIRKDLIREVEMGPFKHTV
DDGLDVRKAAFECMYTLLDSCMEGLDVLLFLDHVEEGLKDHYDIRMLTFLMLARLASLCP
AAVLQRLDRLIEPLKATCTTKVKAGSVKQEFEKQEELRRSAMRAVAALLAVPEVERSPSM
ADFANQIRTNADMASIYQSVQGGEGGGIGPTESMDMS
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgtccagcgtttcctactatatctccaacctgctggagaaaatgacatccactgacaaa
gactttaggttcatggccaccaatgacctgatgcttgagcttcagaaggacagcataaag
ctggatgaagacagtgagaggaaagtggtgacgatgctgctcaaactgctggaggacaag
aacggggaggtgcagaacctggcagtgaaatgcctggcccctctggtgagcaaagtgaag
gagcctcaggtggaggtgatggtggacacgctctgttccaacatgatgtcggacaaagag
ccgctcagagacatttccagcatggggctgaagacggtgatcgctgagctgccgctgact
tccacaggtttgacgctgacagtgggtgtgtgtaagaagatcacctcccagctgatcgga
gcgatggggaaacaggaagacgtctccgttcagttagaggctctggacatcctgtcagac
atgttgggaaggctgagcggtgctctggtcagtttccacagcgctctgctctccagtctg
ctccctcagctgaccagctccaggatggcggtgaggaagcgctccatcttggctctgggt
cacctggttccctgctgtagccccgccctcttctcccagctgactgaacacctgaccaat
gagctcgcaaaggccccgcccgtttccatggcgaggacgtacatccagtgcctagcaacc
gtcagtcgtcagggcggccatcgagtcggtgaacatttagaaaagttaatcccgatggtg
ttgaagttcacggacgtggaggacgacgagctgagagagtactgtttccaggcctttgaa
gcctttatacgcagctgtccaaaggagatgtccccacatgttgccacggtgacaaagctt
tgccttaagttcatgacctttgacccgaactacaactatgacgatgaagaggaggaggaa
gacagcatggacgtggaggaagggctggaggaagagtcagacgatgagtacagtgacgat
gacgatatgagctggaaggtgcgtcgctcctccatcaagtgtctggagtctctgatcgcg
acgcggcgggacctcctgctgagcttcttctcctctgtctgccccgccctgctggcccgc
ttcaaggagcgcgaggagaacgtgagggcggacgtgttcagcgccttctcctcgctgctc
agacagacccgagggggaaccagcctgcagggaaacatgaggcccgggggggaggagccg
gccctcacactgctgaagacacaggtgcctcttatagtgaaggctctgcacaggcagctg
aaggagaagagcatcagatccaggcagggctgcttctccctgctctctgagctgagtcac
actgctcctggagctctggagacgcacatccctgctctgataccaggtatcgtcttctcc
ctcacagacaggtcctcctcctccaccatgaggatcgatgctctctccttcctccatgtt
ctcctcctctcccaccctcctgaagcctttcagccacacatgcaggtgctgctccccccg
gtggtctcctgtgtggaggactccttctataagatcacctcagaggctctgctggtggtc
ctgcagctggtgagagtgatgaggcctcaaggaccctcagcaggggggggattcgacccc
aaacccttcgtcagagaggtgttttccgtaaccttgaagaggctgaaggccacagacatc
gaccaggaagtgaaagagagggctatttcctgtatgggtcacatggtgtgtcacctgggc
gaccacctgggggcggagcttcaaggtgttctggccatcttcctggagaggttgaagaac
gagatcacgagactgaccgccgtccggaccctcaccctcgtctccgcctcgctgctaaag
atcgacctgtcctccatcctgccggagacgctctcagttttgggatctttcctccgaaag
aacgagcgagttctgaagctcgggacgctggcctgtctcacctcgatcatcatgcatcag
gctgcaaacatcaaacctgccgcgctggaaccggtcctgagcgagctgccgggtctggtg
gatgagagcgacatgcacgtatcacaggtctccgtctccctgctcagcgtcatggctcgg
tcctgcccttcctctctcaataggatcagcctctcggtgctgccctgcgtcttcaggctg
gttctctctcctctcctgcagggggcagcgctctcctccattctggacctcctgcaggcg
ctggtgctgtccaacacctccaacatgggctacagtcagttgctgaagtctctcacagat
ccgttccacctcccctcctcctcttcctcctcttcctcccccctgatccacagacagtca
tatctctctgtttctcgctgtgtggcagctctctcctcctcctgccccaaagaaaccccc
tccacggtgaatggactcctgcaggaggtgaagaaccctggttctcctgagtcggcccgt
gtgctggctcttctgtgtctgggggaggtggggaggagcggcagcctgggggggaggaag
gaggtgctgggagtcatcctggaggccatttcttccaccaatgaggaggtgaggacggca
gcgtcctgcgctctgggcagcatggcggtgggcagtctgaacgactaccttcccttcctg
ctgacggagatctccacccagccgaggaggcagtacctgctgctgaactccctcaaagag
gtcatcagtgcctgtccagcctccagtctctcaccccacgttgagtccatctggtctctg
ctcttccagcactgcgagtgtccggaggagggaaccaggaacctggtggctgagtgtctg
ggaaaactgactttagtgaacgctgctcaactcctgccgcgactcaaacagcagctgaga
gccggctctcctctggctcgcagcacggtggtgacggctgtgaaattcactatcgtcgat
catcctgctcccatagacgctctgctgaaagactgcataggtgacttcctgcagaccctg
caggacgacgacctgaacgtgcggcgcgtctccttggtgatgtttaactctgctgctcac
aacaagccgtctctcatccgcggtctcctagcaacagtgctgcctcacctgtacagagag
acccagatcaggaaggacctcatcagagaggtggagatgggtccgttcaaacacacggtg
gacgacggtctggacgtccgtaaggctgcgttcgagtgcatgtacactctcctggacagc
tgcatggaggggctggacgtcctgctgttcctggaccacgtggaggagggactcaaagat
cactacgacatcaggatgttgacgttcctgatgttggcccgcctcgcctctctgtgtcct
gcagccgttctgcagagactggaccgactcatcgagcctctcaaagccacctgcaccacc
aaggtgaaggcgggatcggtgaagcaggagtttgagaagcaggaggagcttcggcgctct
gcgatgcgtgccgtcgcggccctgctggccgtgcccgaggtggagcgcagtcccagcatg
gccgacttcgcaaaccagatcagaaccaacgcagacatggcctccatctaccagagcgtt
caggggggggaggggggcggcatcgggcccacagagagcatggacatgagctag

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