Trematomus bernacchii (emerald rockcod): 117486845
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Entry
117486845 CDS
T09643
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tben03029
]
117486845 (ppargc1b)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
117486845 (ppargc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CDC45
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
117486845
NCBI-ProteinID:
XP_033991306
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MADCAPLLDEELSSFVFSYLTETSGSQYGEEEVCSDRLDNDFPDIDLSQLDTSDFDSVNC
LSELQWCNDQPSDRSPASINYSTTDELFEVSLSLCFLQEENAALLAALTDSLDGMVDAEV
GGLSVFPVLGEEPNQEEEDEDNLSLSAEDFSQSLGSETEDPSLLKKLLLTPPNVPAGIDS
QKVNGSRYSSRSLRTVKPLAKCDLRPDRKPRAVRPSGRLCTELHKHLTTARDTEEDKEEE
EEEEDEEDSESDEEGEDEEEESSSSEVEGGVVAVLPPKSQFSSEKELRSVVDLITYMHTY
CLPIRKQQGWDQRKEAPRPRARNEAPRPTTNAHSRVVLVSAPGTGSNSAPRRMPFARRRE
MKANSLLRDLLQQSSSYDVSKPYGLHTPPYVHSPSRVSHPNKSSSPPSTSSAINKLELRK
DSQRRPPSPDVDFVDFADFAEDGGSFSVRRSRRLASFPSRFGKRLRPGKEREGVMGGKER
EEWEEARAGVKTQTGGATTTTTTEKLMAGELENKHCCHNEKRACLCLPLNSKNTGESQYS
SKPFEQTLGVDLCGTAGLTPPTTPPHKPVEDELFKPSEAGKPSDVVGVSTKASSSWLSRA
HPPRKLPEQTELYAQLRRMGQAGANESYRTFGDHDYCALSLGESRKRSADMLGAILQAQS
GGMDGSKAPKNVDDQGSREREREREEVMVVSQIAELLEQQITTTTTKTTRKLVISSLPPP
SHCQSATATPPVSEEEAERSSASRSPSPTMHLCPDSPASKTDSSENSEICPDDKQRNKAK
SDEDNCQVFYIHNLPTSVTQNVLRKRFQVFGKPEDCKVIICNEERCGVIKIRQAGVQKHW
REREPVFQNAPAGLKRLTRKRYIDLDEAGPGPVKSKYDALDFDTLLKEAQKSLHR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgctccactattagatgaggaactctcgtcctttgtcttcagttacctg
acagaaacctccggcagccagtatggggaggaggaggtgtgttcggaccgtttggacaat
gacttcccggacatcgacctctcgcagctggacacgagcgacttcgacagcgtcaactgt
ctcagcgaactgcagtggtgcaacgaccaaccatcggacagatcaccggcctccatcaac
tacagcaccacggacgagctgtttgaggtctctctctctctctgtttcctgcaggaggaa
aacgccgctctgctcgccgctctgacggacagcttggatgggatggtggatgcagaagtg
ggcgggctctccgtcttccccgtcctgggggaggagcctaaccaggaagaggaagacgag
gacaatctctctctgagcgccgaagacttcagccaatcactggggtccgagacagaggac
ccatctctgctgaaaaagctgctgctgacgcctcccaacgttcccgcaggaatcgattca
cagaaagtcaacggcagtcgatacagcagccgcagcctgaggacggtcaaacctctggcc
aagtgtgacctccgtccggacaggaagccgcgcgccgtccgtccgtccggtcgtctctgc
accgagctgcacaaacacctgaccaccgctcgagacactgaggaggacaaggaggaagag
gaggaggaagaggacgaagaggacagtgagtcagatgaggagggtgaagatgaagaggag
gagtcttccagcagcgaagtggagggaggagtcgtcgctgttcttcctccaaagtctcag
ttcagctcagagaaggagctgcgctcggtggtggatctgatcacctacatgcacacctac
tgcctgcccatccgcaagcagcagggctgggatcaaaggaaggaggcgccgaggccgagg
gcccgaaacgaggcccctcgccccaccactaacgcccacagcagggtggtactggtgtcc
gcgccgggcactgggagcaacagcgccccccgcaggatgccctttgcaaggcggcgggag
atgaaggccaactctctcctccgagacctcctgcagcaaagcagctcgtacgacgtgagc
aagccttacggactgcatacccccccctacgttcactcccccagcagagtctcacaccca
aataaatcttcctcccccccctccacctcctccgctataaacaagctggagctccgtaaa
gactcccagaggcggcctccgagcccggacgtggattttgtggattttgcagattttgcg
gaggacggcggctctttttcggttcgtcgctcccgtcgactcgcctctttcccgagtcgc
ttcggcaagaggcttcggccaggaaaggagagggaaggagtcatgggggggaaggaaagg
gaagaatgggaggaggcgagagcgggagtcaaaacacaaacaggaggagcgacgacgacg
acgacgaccgaaaagctgatggccggagaactagagaacaaacactgctgccacaacgag
aaacgagcctgcctctgtctgcctctcaactccaagaacacaggagagtcccagtacagc
agcaagcctttcgagcagacgctgggagtggatctgtgcgggacggcaggtctcacccct
cccaccaccccgcctcacaaaccagtggaggatgagctcttcaaaccttcagaggcagga
aaacccagtgatgttgtcggcgtttccacgaaggcttcctcgtcctggctttctcgcgct
caccctccacggaagcttccggaacaaacggagctttacgcccagttgcggcgcatgggt
caggcgggcgccaacgaatcctaccggaccttcggagatcacgactactgcgcgctgagc
ctcggggagagcaggaaacgcagcgccgacatgttgggcgccattttacaggcgcaaagt
gggggaatggatggtagcaaagcaccgaaaaatgtagacgatcaggggtcgagggagaga
gagagggagagagaggaagtgatggtggtgtcacagatagcagaattgctggagcagcag
atcacgaccaccacgaccaaaacgacgaggaagttggtgatttcttcgttgccgccgccc
tctcactgccagtcggcgaccgctacgccgccggtgtccgaggaggaggcggagagatcg
tctgcgtctcgctcgccatcacccacaatgcacctgtgtcccgactcccccgccagcaag
acagactccagtgagaactcggagatctgtcccgacgacaagcagaggaacaaagccaag
tctgacgaggacaactgccaggtgttctacatccacaacctgccaaccagcgtgacccag
aacgtgctgcggaaacgcttccaggttttcggaaaaccagaggactgcaaagtcatcatc
tgcaacgaggagcgctgtggggtgataaagatccgtcaggcgggggttcagaagcactgg
agggaacgagagccagtgttccagaacgctcctgcaggtctgaagcggctgacgaggaaa
cgctacatagatcttgacgaggcaggcccgggccccgtgaagagcaagtacgatgcactg
gactttgacactctgctgaaggaggcccagaagtctttgcaccgctga
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