Trematomus bernacchii (emerald rockcod): 117486849
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Entry
117486849 CDS
T09643
Symbol
elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tben03016
]
117486849 (elp1)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117486849 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
117486849
NCBI-ProteinID:
XP_033991313
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MRNLKLLKSLQSSELQILGSPLCLSVRSDTGSLLVASQFCISEYDPRTGQVVSEASLTGL
TGFLPEDGSGGVVGLQDLAELESACLATAGGDVVLFNFNTCQLECVGSVDSGLTSMTWSP
DEELVVLTTGQETIIMMTKEFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKEAA
KKKIQEVQPAADWDDRRPRVTWRGDGQLFAVSAVCKQSGNRKVRVWNREGVLQATSETIN
GLEAPLCWKPSGSLIASSQRHPNKHSVVFMEKNGLLHGDFTLPFSKDQAKVKDLLWNSDS
SVLAVWLEDMTAGEDGLINTCIQLWTVGNYHWYLKQSLDFGRDALRAPRCVCWDPERPLR
LHMLTHSWTSVTYDWSFTTDKSSGSEGSDNANVAVIDGDKILVTNFRQCVVPPPMCSFEL
QLSSPVNQVTFLCQPQRTNQLAALTSDGQISLYVQDLGNDLDLSADGFRRMSRPLVLQKT
FRVCVEPLSLQQLLWLQEDLFVCLTSSLQTTSSLQTTSTLILLLHPDPDDEDSLSVRSQV
EVDGVVLSLAHGSQSGSVALQLEHGQIRRLLYNGPDPSVEEWRDSSGCLINFPVPCVQTA
LCSISGEEHLLGLTDRSHLYVGDTELASNISSFAVCNDFLLITTHSHTCRCLHLNTLTVK
GLQAALVSDGGQNDQNDETLRRVERGSRIVTVVPHDTRVILQMPRGNLETVHHRALLLAQ
LRKWLDSLRFKDAFECMKKLRINMNLIYDHNPKVFLENIQTFITQLNSISHINLFLTELK
EEDTTGSMYPRPPDISPAPQPVSLQKKVDVVCDALRSAMEAMDPNKFFLSILTTHVKKSV
PELEVALQKVHELRVNPPADPGSVSAEEALKYLLFLVNVNDLYDHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKSLEPNYQRYSIDKHLKRYRKALQHLSRAGAEHFPEALQLVKEQ
KLYSEALRLYSADPPHYKALSCVYADHLMQNQQMEQAGLLLWRCGEPAAALQAFASASCW
RNAVCAAQQIPLPPDQIALLARDLAEKLIEQRRHSEAALLLDQYAKDCEEAILALITGSV
WDEALRLIYMHNRQDITETNLKPALLEAFSTQIGFLEVQVATFTRHRIRLSVVREQKEKH
RLDMLDEDGPDCPDAELYSEASSVMTGSKYSHSNSRISSRSSKNRRKAERKKLSLKEGSP
MEDRALMYALGEILTTVDKMREEVHGLLKALVLFHFERQAEKLQQIYEESLQTMEAALPE
VWSDGQNIQTPLTGPNSTANSIMASFQQQQNPAAPQQAAAEVLAPPKMRNGVKWKLAVLS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctgaagcttctgaagagtctccagagctcagagctgcagatcctcggctcc
ccgctgtgtttatctgttcgctctgacaccgggtctctgctggtggcgtctcagttctgc
atctcagagtacgacccgcgcaccggacaggtggtctctgaggcgtctctcactggtctg
actggtttcctcccagaggatggcagtgggggggtggtcgggctgcaggatctggctgaa
ctggagtcggcctgtttggccacagcggggggcgacgtcgtgctcttcaacttcaacacc
tgccagctggagtgtgtgggcagcgttgacagcggtctgacctccatgacctggagtcct
gatgaagagctggtggtcctcactaccggtcaggagacgatcatcatgatgaccaaagaa
tttgagccgatcactgaggtgggaatccatcaggacgactttggagaagggaagttcatc
accgtgggttgggggaagaaggagactcagttccacggctcagaggggaaagaggcggcg
aagaagaagatccaggaggttcagccggctgcagattgggacgaccggcgtcctcgggtc
acgtggagaggagacggtcagctgttcgctgtcagtgccgtgtgcaaacagagcggaaac
agaaaggtccgagtctggaacagagagggagtcctgcaggccacgagcgagaccatcaat
gggctggaggcgccgctctgctggaaaccctcaggcagtctgatagccagctctcagcgt
caccccaacaaacacagcgtggttttcatggagaagaacggacttctgcacggagacttc
actctgcccttcagcaaggaccaggccaaggtgaaggacctgctgtggaacagtgactcc
tctgtgctggccgtctggctggaggacatgacggctggagaggacggactgatcaacacc
tgcatccagctgtggacggtggggaactaccactggtatctgaagcagagcctggacttc
ggcagggacgctctgagggccccgcggtgcgtctgctgggaccctgaacggcccctcagg
ctccacatgttgacccacagctggaccagcgtcacctacgactggagcttcaccaccgac
aagagctcggggtcagagggcagcgacaacgccaacgtggccgtgatcgatggagataaa
atcctggtgacgaacttccgtcagtgtgtggtcccgccccccatgtgctcctttgagctg
cagctgagctcacctgtcaatcaggtgaccttcctgtgccagccgcagaggaccaatcag
ctggcagcgctgacttctgacggacagatttcactctacgtgcaagatttaggaaatgat
ttggacctatcagctgacgggtttcgcaggatgtcccgccccctcgtcctgcagaaaacc
ttcagagtgtgtgtggagcctctctctctgcagcagctcctctggctgcaggaggacctg
tttgtgtgtttgacctccagcctgcagacgacctccagcctgcagacgacctccaccctc
atcctgctgctgcaccctgaccccgatgatgaggactctctctctgtcaggtctcaggtg
gaggtggatggagttgtgctcagtctggctcacggctctcagagcggctctgtggctctg
cagctggagcacggacagatccggaggctcctctacaatggtcctgatccctcagtggag
gaatggagagattccagcgggtgtctcatcaacttcccggttccctgcgtccagacggcg
ctctgcagcatcagtggggaggaacatctgctcgggctgacggacagatcccacctgtac
gtcggagacactgagctggcatccaatatttcctctttcgccgtgtgcaacgacttcctg
ctcatcaccacacactcacacacctgccgctgcctccacctgaacacactcactgtcaaa
ggtctgcaggcggccctggtttcagacggagggcagaacgatcagaacgatgagaccctg
cgtcgcgtggagagaggatccaggatcgtcacggtggtgccgcacgacaccagagtcatc
ctgcagatgcctcgggggaacctggagacggttcatcatcgagcgctgctgctcgctcag
ctcaggaagtggctcgacagtttaaggtttaaagatgcgtttgagtgcatgaagaagctg
cggatcaacatgaacctcatctacgatcacaacccgaaggtgttcctggaaaacatccag
accttcatcactcagctgaactccatcagccacatcaacctcttcctcactgagctcaaa
gaggaggatacgaccggcagcatgtacccccgcccccccgacattagccccgccccccaa
cccgtctccctgcagaagaaggtggatgtcgtttgtgatgctttacgcagcgccatggag
gcgatggatcccaacaagttcttcctctccatcctgacaactcacgtgaagaagagcgtc
cccgagctggaggtcgctctgcagaaagtccacgagctgagagtgaaccctccagctgat
cctgggtctgtgagcgctgaagaggctctgaagtacctcctcttcctcgtcaacgtcaac
gacctctacgatcactcgctgggaacgtacgacttcgacctggtgctcatggtggccgag
aaatcacagaaggaccccaaagagtaccttcccttcctgaacatgctgaagagtctggag
ccgaactaccagcgctacagcatcgataaacacctgaagcgctacaggaaggctctgcag
cacctcagcagggcgggcgcagaacatttcccagaagccctgcagctggtgaaggagcag
aaactgtacagtgaagctctgagactttactctgcagaccctcctcactacaaggctctg
agctgtgtgtacgcggaccacttgatgcagaaccagcagatggagcaggctggcttgctg
ctctggagatgtggagaaccagcagccgctctgcaggcgttcgccagcgcctcctgctgg
aggaacgctgtgtgtgcagcacagcagatccccctgcctcctgaccagatagcactgctg
gcacgagacctcgcagagaagctgatcgaacagaggagacactcagaagctgctctgctg
ctggaccagtacgctaaagactgtgaggaggccatcttggctctgatcactgggtccgtc
tgggacgaggcgctgcgactgatctacatgcacaacagacaggacatcactgagaccaac
ctgaagcctgcgctgctggaagctttcagcactcagattgggttcctggaggttcaggtg
gcgacgttcactcgacaccggatcagactctctgtggtccgagagcagaaagagaaacac
agactggacatgctggatgaagacggtcctgattgtcctgatgctgaactttactctgag
gccagcagtgtgatgacgggatccaaatattcccacagtaactcccgcatttcctcgaga
tcctcaaagaaccggcgtaaagcggagaggaagaagctgagtctgaaggaggggagcccg
atggaggaccgagcgctgatgtacgctctgggagaaatcctcactactgtggacaagatg
agagaggaggtccacgggctgctgaaggctctggttctgttccactttgagcgtcaggcg
gagaagctgcagcagatttatgaagagtctctgcagacaatggaggcggcgcttcctgaa
gtctggagcgacggacagaacatccagaccccgctcactggacccaactccaccgctaac
agcatcatggcgtctttccagcagcagcagaaccctgcagctcctcagcaagcagctgct
gaagtcctggctcctccgaagatgaggaatggagtgaagtggaagctggcggttctctca
taa
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