KEGG   Trematomus bernacchii (emerald rockcod): 117486893
Entry
117486893         CDS       T09643                                 
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117486893 (dtl)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117486893 (dtl)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 NBCH_WD40 ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st MIOS_WD40 WDR54 WD_LRWD1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 117486893
NCBI-ProteinID: XP_033991373
LinkDB
Position
Unknown
AA seq 656 aa
MLFRSIVDRGVGKRRQNAVLADPGPRHPLSSLLGGYHCVRHDEHISYGNLGDSVPPFGLA
FSSVGHMQNILAAANEEGIVRIYNTESREKPLLKEWLAHENAVFDIAWVPGEPHLVTAAG
DQLARLWDVRSGEMLGSFKGHLCSLKSVAFAPQEKAVFCTGARDGNIMVWDTRCSKKDGF
YRQVNQISGAHNKAETNPLTKTKKRRISTRGMAPSVDTQQSVTVVLFQDQHTLISSGAVD
GVIKMWDLRKNYTALRQDPVPLQTYPYPGSCMRMRLGYSGLVLDSTRSNIVCNCTDDNIY
MFNVSGTKTTPVAAFSGHQNSSFYVKSTISPDDQFLASGSSDNNAYIWKISEPNQPPMML
QGHSDEVTSVAWCPTDFTKIASCSDDHTVRIWRLHRKMDGAESSVGEANIVGWACLKSPS
GPSIRAETTPAKIQKTESLGGLASPRLAACAPSGAAMPLSSSTASPIPSQGAKAAAVRQR
TPSSIKKWLSPSRGSPAQASPQPRRVLSLCPQSPASSASPSERRAKRRLETGEGSSAGCG
GAEQCDCVTELYPAAKRSRALSGICCSKQESRLQTDCHTEDSEQLSQTGKENCSPGPMDW
LSVLGQKMRKGQGSPRSPRSHSASKRQEGKTPVSPTIRSPQSIKKISMYFARRPLE
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgctgttccgctcgatagttgacagaggagtgggcaaacgaaggcagaatgccgtcctt
gcagaccccgggccgaggcaccccctgagctctctgctgggggggtaccactgcgtccga
cacgatgaacacatctcttacggcaacctgggggactctgtgcccccgtttggactggcc
ttctcctctgtcggacacatgcagaacatcctggcagcagctaatgaagaaggcattgtt
agaatctacaacacagagagccgggagaagccacttctaaaagaatggctggcccatgag
aacgctgtttttgacatagcctgggtaccgggggagcctcacttggttactgctgctggt
gatcagttggccaggctgtgggatgtgaggtcaggggagatgttaggcagcttcaaaggt
cacctctgcagcctcaagtctgttgcattcgcaccacaggagaaagctgtgttctgtact
ggggccagagatggaaatattatggtctgggacaccaggtgcagcaaaaaagatggtttc
tacaggcaggtgaaccagatcagtggcgctcacaacaaagcagagacaaaccccctcacc
aaaaccaagaagaggcggatcagcacacgtggcatggctcccagtgtggacacccagcag
agtgtcaccgtggttctgttccaggatcagcacaccctcatctcctctggggctgtcgat
ggtgtaatcaagatgtgggatctgaggaagaactacactgcactacgtcaggatcctgtt
cctctgcagacgtacccctacccgggttcctgcatgcgcatgagactgggttattccgga
cttgttctggactcaaccagatccaacatcgtatgtaactgcactgatgataatatctac
atgttcaatgttagcggaacaaaaacaactccagtggcagctttcagtggccaccagaac
tcctccttttatgtaaagtccactattagccccgatgaccagttcttagccagcggttca
agtgacaataacgcatacatctggaagatctcggagcctaatcagcctcccatgatgctc
caaggccatagtgacgaagtgacatctgttgcatggtgtccgacagattttaccaagatt
gcttcctgttctgatgatcacactgtacgtatctggaggcttcaccggaaaatggatgga
gccgaatcctcagtgggagaggccaacattgtcggctgggcatgtcttaaatctccctca
gggccttctatcagagctgaaacaacccccgccaagatccagaagacagagagtctcggc
ggcctggcgtccccccggctcgctgcctgtgctcccagcggagccgcaatgcctctctcc
tccagcaccgcctctcccatcccttctcagggtgccaaagctgccgctgtccgccagaga
acaccatcctctatcaagaaatggttatccccgagccgtgggtctcctgctcaggccagc
cctcagcctcgccgcgtgctcagtctgtgtcctcagagcccggcgagcagcgcctctccc
agcgagcgacgggccaaacgcaggctggagacgggagaggggtcttctgcaggctgtggg
ggggcagagcagtgtgactgtgttactgaactctacccggcggccaagagaagccgggct
ctgtcggggatctgctgctccaagcaagagagccggctacagacagactgtcacacagag
gacagcgagcagctctctcagaccggcaaggagaactgctcccccggacccatggactgg
ctgtcagtgctgggccagaagatgaggaaaggtcaaggaagcccgaggtctcccagaagc
cacagtgcctctaagagacaagaaggcaagacaccagtttctccgacaatccgctcaccg
cagagcataaagaaaatctccatgtatttcgcaagaaggcctctggagtga

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