Trematomus bernacchii (emerald rockcod): 117486925
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Entry
117486925 CDS
T09643
Symbol
rbm25b
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 25b
KO
K12822
RNA-binding protein 25
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117486925 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117486925 (rbm25b)
Spliceosome [BR:
tben03041
]
Complex A
U1 snRNP components
U1 related factors
117486925 (rbm25b)
Complex B
117486925 (rbm25b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
117486925
NCBI-ProteinID:
XP_033991410
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MSFPPHLNRPLLPPPGMPPQFAGFASGGQMIPMHMGIMTPSIMMPSMQVISKPPMHKKDI
MRVKENNENSGPTTTVFVGNISEKASDMLIRQLLAKCGIVLSWKRVQGASGKLQAFGFCE
YKEPESTLRALRLLHDLNIGDKSLLVKVDAKTKAQLDEWKAKKKIANGTKKAEDGGDDEE
EVLDEETKKKDQITKGAIDGLMQEYASELNAPSQDEDSQRRKRRKEKKEEDDLNTIDMED
DKRDLISREISKFRDTHKKLEEEKDKREKERLEFERERRDREKERERERERRDREREKER
EREQEREKQRERERDRDKDRERRPRERERERDWERDRSRDMTRDMTRDMTRDMTRDMTRD
MTRDMTRDVTPERSRSREVSRDRDKKRDQEDEEEAYDRRKLERKLRDKEAAYQERLKNWE
LRERKKARDYAKETERDDERRREMVKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDR
EKETEADERDRKREKEELEEIRQRLLDEGHPNPDAELRRMEEEEEERRRQPPIIPEPEPE
EERKRHKGSREHRDRRHEQPRPEPAARPVQSDNEVEEGEEEEFENDEENPDVKPCLKPTM
RPITTAPSVSSASGGASPNSPGDESPCGIIIPHENSPPDALPQEENRPKIGLSLKLGASG
SPSQPNVIKRKKLPGDSVFDKFDDEETSEQPRKRKLVPLDYDDDKSLGVDGASSIKGANT
EEKRKNIKTLIEKIPTAKPELFSYPLDWTMVDTTLMDRRVRPWINKKIIEYIGEEEATLV
DFVCTKVMAHSMPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccctcatttaaaccggccgctgttgccccctcctgggatgccccctcag
tttgctggcttcgcctcaggaggtcaaatgatcccaatgcacatgggcatcatgacccct
tcaataatgatgccttctatgcaagtgatcagtaagcctccaatgcataaaaaggacata
atgcgagtcaaagaaaacaatgagaacagcgggcccaccaccacagtgtttgtggggaac
atatcagagaaagcttcagacatgctgatcagacagctgcttgcgaagtgtgggattgta
ctgagctggaagagagtccagggagcctctggcaagcttcaagcctttgggttttgtgag
tacaaggagccagagtccacattgcgagcactgcggctgcttcatgacttgaatattgga
gacaaaagtctgttggtgaaggtggatgccaagactaaagctcagctggacgagtggaag
gccaagaaaaagattgcgaatgggaccaagaaggcggaagatggaggagatgatgaggaa
gaggttctagacgaggagacgaagaagaaggatcagatcaccaaaggtgctatcgatgga
ctgatgcaggaatatgcttccgaactcaacgcgccttcacaggacgaggactcccaacga
cgaaagagaagaaaggagaaaaaagaagaggacgaccttaacactattgatatggaggac
gacaagagggacctcatttccagagaaattagtaaatttcgagacacccacaagaaacta
gaagaagagaaggacaagagggagaaggagcggctggagtttgagcgggagcgcagggat
cgggaaaaagagcgggagcgggaaagagagcgacgggaccgcgagagggagaaggaacga
gagagggaacaggagagggaaaaacagcgagagcgggagagagacagagataaagaccgc
gagcgacggccccgagagagagagcgagaaagagactgggagagggacaggagccgggac
atgacccgggacatgacccgggacatgacccgggacatgactcgggacatgactcgggac
atgacccgggacatgacccgggacgtgacccccgaacgcagccgatccagagaggttagt
cgagacagagacaagaaacgagaccaagaagatgaagaggaggcgtatgaccgcaggaag
ctggagaggaaactcagagacaaggaagcagcctatcaggagcgactaaaaaactgggag
ctcagagagaggaagaaggctcgggattacgccaaggagaccgagagggacgatgagcgc
agacgagaaatggtgaaggagggcaaacggttgaaagagtttcttgaagactatgatgat
gacagagatgaccccaagtactacaggggcagtgcgctgcagaagcgtctcagagaccgc
gagaaggagacggaggcagacgagcgtgacaggaagagagagaaggaggagctggaggag
atcagacagaggctgttagacgagggacatccaaacccagacgcagagcttcgcaggatg
gaggaggaagaggaggagcgtcggagacaacctcccatcataccagagccggagcccgag
gaggaacgtaaacgccacaaaggttcacgagaacaccgggaccgccgtcacgagcagccc
cggccagaacccgccgcacggcctgtccagtcagacaatgaggtggaggagggggaggaa
gaggagtttgaaaatgacgaagaaaaccccgatgtcaaaccgtgtttgaagcctacaatg
cggcccatcacaacagcaccctcggtttcttctgccagtggcggcgcgtccccgaactca
ccgggggacgagtctccctgcggcatcatcatcccccacgagaactccccccccgacgcc
ctgccgcaggaggagaaccggcccaagatcggcctcagcctcaaactgggtgcctcagga
agccccagtcaacccaacgtcatcaagagaaagaagctgcccggggacagcgtcttcgac
aagtttgatgatgaagagaccagcgagcagcctcgcaagaggaagctggttcccctggac
tacgacgacgataagagcctgggggtggacggggcatccagcataaagggggccaacacc
gaggagaaacgtaaaaacatcaagaccctgatagagaagatccccacagcgaagcccgag
ctgttctcctaccctctggactggactatggtcgacacgacgttaatggaccgtcgtgtt
cggccgtggatcaataaaaagattattgagtacattggagaggaagaagcgacactcgtg
gactttgtctgcaccaaggtgatggctcacagtatgccacagagtatcttggatgatgtt
gctatggttcttgacgaagaagcagaggtctttattgtgaagatgtggaggttactcatt
tacgaaaccgaagccaagaagattggattggtgaaatga
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