Trematomus bernacchii (emerald rockcod): 117486936
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Entry
117486936 CDS
T09643
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117486936 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117486936 (capn3b)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117486936 (capn3b)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C2: calpain family
117486936 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
TRAP_alpha
Sec62
Motif
Other DBs
NCBI-GeneID:
117486936
NCBI-ProteinID:
XP_033991424
EnsemblRapid:
ENSTBNG00005001611
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MGDEQHKEPVVEDIQVKVLYETEASSGPDEKAAYPPAGTNSIYSAILSRNEAVKDATRLK
TFLELRDKYAKKKVVFEDPLFPANDSSLFYSHKPTMKIEWKRPSEICDDPQFIVDGANRT
DICQGTLGDCWLLAAIACLTVNEKLLYRVIPPDQSFTENYAGIFHFQLWRYGEWVDVVVD
DRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
ELSEAPKELYSIMRKALDRGSLMGCSIDITSADEMESRTEQGLVKGHAYSIIGLAECDEV
AKDNKIRLIRLRNPWGWVLWKGPWSANSKEWSTISTADKENLKKQTVEESEFWMAFDEFK
KNFTKLEMCNLTPDTLQCEERTSWTVSVNEGRWVRGSSAGGCRNNKNTFWTNPQYRLQLS
EEDDDPEDRQAACTVVVALMQKGRRMQRHQGAKFFTIGFSIYEVPKEMLGQNQHLQKDFF
LYNASKAKCKTYINLREVTERIHLPPGEYVIVPTTFEAHQEGEFILRVFSEKQNITEEED
SVGSDKTQQDTKKKEKPIVFVSDRAKANKEIEHDGIRGEKKKKKKPKINLLQEEEETEEE
KLFRAIYQKIAGDDMQICANELKTVMKNVLSKHNDIKTEGFSIETCRSMIALMDTDGTGK
LNLQEFKHLWKKIKEWQLIFRKYDKDKSCSISSFEMRNAVNDAGFHLNKQLYDIIAMRYA
DEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGVIKLNVLEWLQLTMYS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgagcaacataaagagcctgttgttgaagatatacaggtgaaagtgctttat
gaaactgaagcatcatctgggcccgatgagaaagctgcctaccctcctgctggaactaac
tccatctactctgccattctgagccgaaacgaggctgtcaaggatgccacgcgactaaag
acctttttggaacttcgagacaaatacgcgaagaagaaggtggtgtttgaagaccccctg
tttcctgcaaatgactcctcactcttttacagtcacaaacccaccatgaagattgagtgg
aaacgtccctcggaaatatgtgacgacccccagttcattgtagatggagccaacaggaca
gacatctgtcaaggaacattaggtgactgctggctgctcgctgccatcgcctgcctcact
gtgaacgagaagctgctgtacagagtgatcccccccgaccagagcttcaccgaaaactac
gccggcatcttccatttccagttgtggcgttatggagaatgggtcgatgtggtggtggac
gaccgtatccccacctgcaacaaccagctggtcttcaccaaatctttcaggaagaatgag
ttctggagcgctcttctggaaaaagcttatgccaagttgcacggatcatatgaagccctt
aaagggggcaacactttggaggccatggaggatttcaccggaggggttacagagttcttt
gagttgtctgaagcccccaaagagctctacagcatcatgaggaaggcgctggacaggggc
tcgctgatgggctgctccatagatattacttcagccgatgagatggagtctcggactgaa
cagggtctggtcaaaggtcatgcttactccatcataggcctggcagagtgtgacgaggtg
gcaaaggataacaagattcgcctgattcgcttacgcaatccctggggctgggtgctgtgg
aagggaccatggagtgcaaattcaaaggaatggtcgaccatttccacggctgacaaggaa
aacctaaaaaaacagactgtagaggagagtgagttctggatggcttttgatgaattcaag
aagaacttcacaaagctggagatgtgtaacctgactcccgacaccttgcagtgtgaggag
aggaccagttggacagtgtcggtcaacgagggtcgctgggtgcgtggcagctctgctggc
ggctgcaggaacaacaaaaacactttctggacgaaccctcagtatcggctgcagctgtcc
gaggaggacgacgaccccgaggaccgccaggcggcctgcaccgtggtcgtggctctgatg
cagaaaggtcgcaggatgcagcgccaccaaggggccaagttcttcaccatcggattttcc
atctacgaggtgcccaaggagatgcttggacagaatcaacacctacagaaggacttcttc
ctgtacaacgcctccaaagctaaatgtaagacctacattaacctgcgggaggtgacggag
cgcatccatcttcctccaggagagtacgtcatcgtccccaccacctttgaagcccatcag
gagggggagttcatcctcagggtcttctctgagaagcagaacattacagaggaggaggat
agcgtcgggtctgacaaaacacagcaagacacgaaaaagaaggagaagcctattgtattt
gtgtcagacagagcaaaagccaacaaagaaatcgagcatgacggcattcggggagagaag
aagaagaagaagaagccaaagataaatctactccaagaagaggaggagactgaggaggaa
aaactgttcagagccatttaccaaaagattgctggagatgacatgcagatctgcgccaac
gaactcaagacggtcatgaagaacgtgctctctaaacataatgacataaagacagagggt
ttcagcattgagacatgtcggagtatgatcgctttgatggatactgatggtacggggaag
ctgaacctgcaggagttcaaacacttgtggaaaaagatcaaggagtggcagctgatcttc
agaaaatacgataaagacaaatcttgctccatcagcagttttgagatgaggaacgctgtt
aatgatgcagggttccacctgaacaaacagctgtatgacatcatagccatgcgctacgca
gacgaacacctcaacatcgacttcgacagttacatctgctgcttcgtgagactagagggc
atgttcagagcttttaacgcctttgacaaagacggagatggagtaataaagctcaatgtc
ctggagtggcttcagctgaccatgtattcttaa
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integrated database retrieval system
