Trematomus bernacchii (emerald rockcod): 117487094
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Entry
117487094 CDS
T09643
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117487094
04081 Hormone signaling
117487094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117487094
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117487094
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117487094
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117487094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117487094
NCBI-ProteinID:
XP_033991627
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MEPMSNKQDSNSSEGDEKGWPDVPKRKRKNSLCSGKSVSALSVPGYIPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYEGCCIIDKITRNQCQLCRFKKCI
AVGMAMDLVLDDSKRVAKRRLIEENRQKRKKEEMVRTLQTRPEPDSPEWDLIRMVTEAHR
HTNAQGAAWKQKRKFLSDDIGQGPMIPTSDGDKVDLEAFSEFTKIMTPAITRVVDFAKKL
PMFSELSCEDQIILLKGGCMEIMSLRAAVRYDPESETLTLNGEMAVKREQLKNGGLGVVS
DAIFDLGKSLAQFNLDDSEVALMQAVLLMSSDRSGLTNIEKIEQCQEAYLLAFEHYINFR
KHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaatgtccaacaagcaggacagcaactcatcagagggagacgagaaagggtgg
ccagatgtgccgaagagaaagagaaagaacagcctttgttctgggaagagcgtgtcagct
ctcagtgttccaggatacatccccagctacctggagaaggacgagccctgcgtggtgtgt
ggagacaaggccacgggctaccactaccgctgcatcacctgcgagggctgcaagggcttc
ttccgcagaaccatccagaagaacctgcacccggcgtactcctgtaaatatgagggatgc
tgtatcatcgacaagatcacgcgcaaccagtgccagctgtgtcgcttcaagaagtgcatc
gccgtgggcatggccatggacttggttctggacgactctaagcgcgtggcgaagcgtcgt
ctgatcgaggagaaccgtcagaagaggaagaaggaggagatggtccggacccttcagacc
cggccggagcccgactcccccgagtgggacctgatccgcatggtgacggaggcgcaccgg
cacaccaacgcccagggggccgcctggaagcagaagcgcaagttcctgtcggatgatatc
ggtcagggtccgatgattcccacttcagacggagacaaggtggacctggaagccttcagc
gagttcacgaagatcatgacccccgccatcacacgcgtggtggacttcgccaagaaacta
ccaatgttctcagagctgtcctgtgaagaccagatcatcctcctgaagggcggctgcatg
gagatcatgtctctgcgcgccgccgtgcgctacgacccggagagcgagacgctgacactg
aacggagagatggcggtgaagcgagagcagctgaagaacggagggctgggcgtggtgtcg
gacgccatctttgatttgggcaaaagcctggctcagttcaacctggacgactcggaggtg
gcgctgatgcaggccgtgctgctcatgagctcagaccgctcaggactcaccaacatagag
aagatcgagcagtgtcaggaggcgtacctgctggccttcgaacactacatcaacttcagg
aagcacaacattccccacttctggcccaagcttctgatgaaggtgacggaccttcggatg
atcggagcgtgccacgccagccgcttcctgcacatgaaggtggagtgtcccaacgaactc
ttcccccctctcttcctggaggtcttcgaggaccaggaagtgtga
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