Trematomus bernacchii (emerald rockcod): 117487187
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Entry
117487187 CDS
T09643
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00562
Inositol phosphate metabolism
tben01100
Metabolic pathways
tben04020
Calcium signaling pathway
tben04070
Phosphatidylinositol signaling system
tben04081
Hormone signaling
tben04082
Neuroactive ligand signaling
tben04261
Adrenergic signaling in cardiomyocytes
tben04270
Vascular smooth muscle contraction
tben04310
Wnt signaling pathway
tben04371
Apelin signaling pathway
tben04540
Gap junction
tben04621
NOD-like receptor signaling pathway
tben04912
GnRH signaling pathway
tben04916
Melanogenesis
Module
tben_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117487187
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117487187
04371 Apelin signaling pathway
117487187
04020 Calcium signaling pathway
117487187
04070 Phosphatidylinositol signaling system
117487187
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117487187
04081 Hormone signaling
117487187
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
117487187
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117487187
09152 Endocrine system
04912 GnRH signaling pathway
117487187
04916 Melanogenesis
117487187
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117487187
04270 Vascular smooth muscle contraction
117487187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117487187
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
117487187
Membrane trafficking [BR:
tben04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117487187
Endocytosis
Macropinocytosis
Phospholipase C
117487187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
C2
EF-hand_like
DUF4277
Motif
Other DBs
NCBI-GeneID:
117487187
NCBI-ProteinID:
XP_033991736
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MASAQPGVHALKLQPPSVSATLRNGSNFIKWDEDLSTVHPVTLHVDPHGFYLYWTDQNKE
TELLDLTFVKDVRTGRSTKTPKEAKLRELLDIGNLVGRLENRMVTVVTASDLVNVNQLNF
IASQEDEAKVWCEELFSLSSNLLSHNLNRDHSLLKAFVRLTLQPNAEGRIPVKNIVRLFS
SDRKRVENSLENCKLPYGRGDSIKLEDFTPEIYRSFLESLCPRPELSSIFKLQGWGDRTL
TLDQMTDFINNKQRDPRLNEILYPPLRPAQTHSVMERHQQDQDQLKKGVISLQALSSYLS
SDENGIIPPEKLDQSEDMSFPLSHYIINSSHNTYLTAGQLAGSSSVEMYRQVLLAGCRCV
ELDVWKGRTAEEEPVITHGFTMTSEIPFKEVLEAIAECAFKTSPFPVILSFENHVDSSKQ
QAKMAEYCQSIFGDALLIDPLDKYPLEAGVPLPSPQELMGKILVKNKKSHKPSANTDTKR
LTDLAANLSHESASPSNNTGEMEAESEEEDDDEDDDGKKGSAEREAVATEEMSTLVNYVQ
PTKFNSFEASKKAARCHHMSSFVETKALEHLTKTPVEFVEYNKSQLSRIYPKGTRVDSSN
FMPQLFWNAGCQLVALNYQTIDLSMQLNLFMFEYNGRSGYRLKPEFMRRPDKHFDPFAEN
TVDGIVANTLSVKVISGQFLTEKRVGVYVEADMFGLPADTRRKALKTKTSQNNNAVNPVW
DEEPIVFKKVILPTLASLRIAAFEEGGKFIGHRIIPVSAIRPGYRYISLRNEKNQSLVLP
AVFVYIEVKDYVPDTFADVIEALSNPIRYVNLLEQRSKQLAALTLEDGEEDAHTEDEADT
CAERKADLKPAPQENGLSPTPGHAGHTPISTTPKAAAANQQAATTEAAKPAAKSEDLVLS
VLIDVPVCSMEALQQSKVYQKEQRRQFKELKELVRRHQKKTSELLREINNKFKKTVRQCS
KSRGSEVEKDERLQQLRDEQQQQLLTLRQEQYYSQKYLQREHIKMLTERLSSLAEESHNT
QMKKLKDICDKEKKELKRQMDRRRTEKINQAKTKEKHLAEEEKTEINKSYVNEVVQNIKR
LEETQTKRHDQLVEQHTELLQEIQDLKPKLQGSVEAEFQEKFQCLPGEIEDFLQDRKSEV
RSHSKSRPSTPHEGLSEDD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgctcagccgggggtccatgctctgaaactccagcctccctccgtctccgcc
acgctgaggaacgggagcaacttcataaaatgggacgaggatctgtccactgtgcatcca
gtgacgcttcacgtggatcctcatggattttatctctactggacagaccaaaataaggag
acggagctgttggacctaacctttgttaaagatgtcagaacagggaggagcaccaaaaca
ccaaaggaggccaagctgcgggagctgctggatatcggcaatctggttggccgactggag
aaccgcatggtcaccgtggttacagcctcagacctggtgaacgtcaaccagctgaacttc
atcgcctcacaggaggacgaggcaaaggtgtggtgtgaggaactgttttctctgtcttcc
aatctgctgagccacaatctcaacagggaccacagtctgttgaaagcgttcgtcaggttg
actctccagccgaacgcagaggggaggattcccgtgaagaacattgttcgcctgttttct
tcagacagaaagagagtagagaactctctggagaactgcaagctgccctacggacggggg
gacagcatcaaactggaggacttcacgccggaaatctacaggagctttttggagagcctg
tgtcctcgtcctgagctcagcagcatcttcaaactgcaagggtggggtgacaggacgctg
actctggatcagatgaccgacttcatcaacaacaaacagagagacccccgcctcaatgag
atcctctacccccccctccggcctgcacagactcactctgtgatggagagacaccagcag
gaccaggaccagctgaagaaaggcgtgatctccctgcaggccctctccagttatctctcc
agcgatgagaacgggatcatccctccggagaaactggatcagtctgaagacatgagcttc
cccctgtcacactacatcatcaactcctcacacaacacatacctgacagcgggtcagctg
gccggcagctcctcggtggagatgtacaggcaggttctgctggccgggtgccgctgcgtg
gagttagacgtctggaaaggacggacggcggaggaggaaccggtcatcacacacggcttc
accatgacctcggagatacccttcaaggaagtgcttgaagcgattgcagagtgtgccttc
aagacctcacctttccccgtcattctctcctttgaaaaccacgtggactcttcgaagcag
caggctaaaatggctgaatactgtcaatctattttcggggatgcgctgctgatcgaccct
ctggacaaataccctctggaggcaggcgtccctctgcccagtcctcaggaactgatggga
aaaattctcgtcaaaaacaagaaatcccacaaaccctcggctaacacggacaccaaacga
ctgacggaccttgcagccaatctgagccacgaatcagcgtctcctagcaacaacacggga
gagatggaggctgagagtgaggaagaggatgatgatgaagatgatgatggtaaaaagggc
tcagcagagcgcgaggccgtggccaccgaggagatgtccacgctggtgaactacgtccag
ccaaccaagttcaactccttcgaagcttcaaagaaggcagctcgttgtcaccacatgtcg
tccttcgtggagaccaaagctctggagcatctcacaaagacaccggtggagtttgtggaa
tataataaatcccagttgagtcgtatctacccaaaaggaaccagagtggattcctctaac
ttcatgccgcagcttttctggaacgccggctgtcaactcgtggctctcaactaccagact
atagatttgtccatgcagctgaatctcttcatgtttgagtataatggtcgcagcggctac
agacttaagccggagttcatgagacgaccggacaaacacttcgacccttttgcagaaaac
acggtggacggcatcgtggctaacaccctctctgtgaaggtaatttcaggacagtttctc
actgagaagcgtgtgggtgtgtatgtggaggcggacatgttcggacttcctgcagacacc
aggaggaaagccctgaaaactaaaacctctcagaacaacaacgccgtcaacccggtgtgg
gacgaggagcccatcgtcttcaaaaaggtgattcttcccactctggcctcgctgaggatc
gctgcttttgaggaaggaggaaagtttatcggtcatcggattattccagtgtctgccatt
agaccaggttatcgttacatcagcttgaggaacgaaaagaatcagtctctggttctgccg
gctgtgtttgtctacatcgaggtcaaagactacgtcccagacacctttgcagatgtgatc
gaggctctgtccaacccgatccggtacgtgaaccttctggagcagcggtccaaacagctg
gccgcgctgacactggaggatggagaggaggacgcacacaccgaggatgaggcagatacc
tgtgcagagcgtaaggctgatctgaaaccagctcctcaggagaacgggttaagccccacc
cccggccatgcaggccacacccccatctccaccacacccaaagccgccgcagccaatcag
caagcagctacgacagaagcagccaaaccagcagcaaagagtgaagatctggttttaagt
gttttgatagatgtgccggtgtgctccatggaggctctgcagcagtcgaaggtttaccag
aaggagcagcggcggcagttcaaggagctgaaggagctggtgaggaggcaccagaagaaa
acctccgaactgctccgagaaatcaataacaagttcaagaagacggtccggcagtgcagc
aagagcaggggttcggaggtggagaaggacgagcgtctgcagcagctcagagacgagcag
cagcagcagctcctgactctgaggcaggagcagtactacagccagaagtacctgcagaga
gaacacatcaaaatgctgacggagaggctgagcagtctggctgaggagagtcacaacacg
cagatgaagaaactcaaagacatctgcgacaaggagaaaaaagagttgaagagacagatg
gatcgaaggagaacagagaagatcaaccaagcgaagaccaaagagaaacatctggcagaa
gaggagaagactgagatcaataagtcctacgtcaatgaagtcgtccagaacataaaacgg
ctggaggagactcagacgaagcgccacgatcagctggtggagcagcacaccgagctcctg
caggagatacaggacctgaaaccaaagctgcagggctcggtggaggctgagttccaggag
aagtttcagtgtttgcccggagagatcgaggacttcctgcaggacaggaagtcggaggtc
cggagtcacagcaagtcccgcccctccactcctcacgagggtctgtcggaggatgactga
DBGET
integrated database retrieval system
