Trematomus bernacchii (emerald rockcod): 117487188
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Entry
117487188 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117487188
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117487188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117487188
NCBI-ProteinID:
XP_033991737
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MKRNHQGPDSPGPGPESEPEPGPVLRPVPLPRHRPGLGTGSRPVPGSVISSRHGPRPVPG
PKPVPGPKPVPGPKPVPGPKPVPGPKPVPGPKPVPGPKPRPSHVSLKADHSHELDNDFKR
KIVSAANSKQQREKLPVPSCLSITSDHSFGRYINFKDESHSYDPVSKQQREKLPVPSCLS
IKSDQSFGRYLNFKDESHSYDPVVDHKSSEVTTGQSSKQHQTQLDSIFMLLEENIVTFMK
KELKKIQKALSSDHPESLESQSEDEEVLDGEDEEQRRSSREAFLKITLHFLRRMKQEELA
ECLQRRIIVQVCQHKLKSKLQKKFQCVFEGIAKAGNPTLLNQIYTELYITEGGTAEVNDE
HEVRQIEKASRKPDRPEKTIRQEDIFKPSPGRDAPIRTVMTKGVAGIGKTVLTQKFTLDW
AEGKANQDIQFTFPFTFKELNVLKEKKYSWVELVNHFFTETEDAGMHRFDLFPVVFIFDG
LDECRLPLDFHNTEVLTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPECV
DMVTEVRGFTDPQKEEYFRKRFTDKEQAATIISHIKTSRSLHIMCHIPVFCWISATVLED
MLKTKEGGELPKTLTEMYIHFLVVQAKVKNIKYDGGAETDPHWSRKSRKMIESLGKLAFE
KLQEGNLIFYESDLTDCGIDITAASVYSGVFTQVFKEERGLYQDRVFCFVHLTIQEFLAA
LHVHLTFINSGVNLMAEDQTTSQKSDVKPKLTDLYQSAVDKAVQSPNGRLDLFLRFVLGL
SLQANQTLLRGLMKQTESSLETNQETVQYIKKKMDEDLSPERSINLFHCLNELNDRTLVE
QIQQSVSSGSLSRDKLSPALWSALVFILLSSDKDLDVFDLQKYSASEEALLRLLPVVKAS
NKALLSGCDLSERSCEALSSVLSSQSSSLRELDLSNNDLPDSGVKLLSAGLESPNCTLET
LRLNSCDLSVRSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKFLSSGLESPNCALETLR
LSGCMATEEGCAFLASALSSNPSHLRELDLSYNHLGDSGVKLLTAGLDDPHWRLDTLRVE
PGGVRWLRQGLRKYSCELTIDTNTVNRNLKLCESNRKVTHVEEEEPYPDHPNRFDFWPQL
MCENALTGRCYWEVEWTGRAYISLSYRGISRRGDRENCRFGENDQSWSLDCFDSRPYSFC
HNKTEMLSSSPFYYSFPSAVYSCPSSSHPSSSPSLISDRLAVYLDYPAGSLSFYSVSSDT
LTHIHTFRTTFTEPLYPGFTVWSGSSVSLCSLQDGEKIRRPCSVFSQEREGLSEVVYL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaaccatcagggaccagactcccctggacctggacctgaatctgaacctgaa
cctggacctgtacttcgacctgtacctttacctcgtcatagacctggacttggaactgga
tctagaccagtacctggatctgtaatatcctctcgacatggacctagacctgtacctgga
cctaaacctgtacctggacctaaacctgtacctggacctaaacctgtacctggacctaaa
cctgtacctggacctaaacctgttcctggacctaaacctgtacctggacctaaacctagg
ccgagccatgtgtccttaaaggctgaccattcacatgagcttgacaacgatttcaaaaga
aaaattgtatcagctgcaaattccaagcagcagagggaaaagttgcctgtacccagttgt
ttgtccattacgagtgatcattcattcggtcgatatattaacttcaaagatgagagccat
tcttatgacccagtttccaagcagcagagggaaaagttgcctgtacccagttgtttgtcc
attaagagtgatcaatcatttggtcgatatcttaacttcaaagatgagagccattcttat
gacccagtagtggaccataaaagctcagaggttaccactggtcagtcttccaaacagcat
caaacacagctggactctatatttatgctgctggaggagaacattgtcacttttatgaag
aaagagcttaagaagatccagaaggctctgagttcagatcaccccgaaagcttagagagt
cagagtgaggatgaggaggtgttggatggtgaggacgaagagcagaggaggagcagcaga
gaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggaggagctggct
gagtgtctgcagagaagaattatcgttcaagtctgtcagcacaaacttaaatctaaactg
cagaagaagttccagtgtgtgtttgagggcattgctaaagcaggaaacccaacccttctg
aatcagatctacacagagctctacatcacagagggggggactgcagaggtcaatgatgaa
catgaggtcagacagattgaaaaagcatccaggaaaccagacagacctgaaaaaacaatc
agacaagaagacatctttaaaccctcacctggaagagatgcaccgatcagaacagtgatg
acaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgg
gctgaaggcaaagctaaccaggacatacagttcacatttccattcactttcaaagagctg
aatgtgctgaaagagaaaaagtacagctgggtggaactcgttaatcacttctttactgaa
accgaagacgcaggaatgcacaggtttgatctgttcccggttgtgttcatctttgacggt
ctggatgagtgtcgacttcctctggacttccacaacactgaggtcctgactgatgtaaca
gagtccacttcagtggatgtgctgctgacaaacctcattagggggaatctgcttccctct
gctcgtctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtg
gacatggtgacagaggtccgagggttcactgacccacagaaggaggagtatttcaggaag
agattcacagataaggagcaggcagcaacaatcatctcccacattaagacatcacgaagc
ctccacatcatgtgccacatcccagtcttctgctggatctctgctacagttctcgaggac
atgttgaaaaccaaagagggaggagagctgcccaagaccctgactgagatgtacatccac
ttcctggtggttcaggccaaagtaaagaacatcaagtatgatggaggagctgagacagat
ccacattggagtcgaaagagcaggaagatgatcgagtctctgggaaaactggcttttgag
aagctgcaggaaggcaacctgatcttctatgaatctgacctgacagactgtggcatcgat
attacagcagcctcagtgtactcaggagtgttcacacaggtctttaaagaggagagagga
ctgtaccaggacagggtgttctgcttcgtccatcttaccattcaagagtttctggctgct
cttcatgtccatctgacattcatcaactctggtgtcaacctaatggcagaagatcaaaca
acctcccaaaagtctgacgtaaaacctaagctaacagacctttaccagagcgctgtggac
aaggccgtacagagtccaaatggacgcctggacttgttcctccggttcgtcctgggtctt
tcattgcaggccaatcagaccctcctacgaggtctgatgaaacagacagaaagtagctta
gagaccaatcaggaaacagtccagtacatcaagaagaagatggatgaggatctgtctcca
gagagaagcattaatctcttccactgtcttaatgaactgaatgatcgtacgctagtggag
cagatccaacagtctgtgagttcaggaagtctctccagagataaactctccccagctctg
tggtcagctctggtcttcatcttactgtcatcagacaaagatctggacgtgtttgacctg
cagaaatactctgcttcagaggaagctcttctgaggctgctgccagtggtcaaagcctcc
aacaaagctctactgagtggctgtgacctctccgagagaagctgtgaagctctgtcctca
gttctcagctcacagtcctccagtctgagagagctggacctaagtaacaacgacctgccg
gactcaggagttaagttgctgtctgctggactggagagtccaaactgtacactggaaact
ctcagactcaattcgtgtgacctctccgtgagaagctgtgaagctctgtcctcagttctc
agctcacagtcctctagtctgagagagctggacctgagtaacaacgatttgcaggattca
ggagtgaagttcctgtctagtggactggagagtccaaactgtgctcttgaaactctcagg
ttgtcaggttgtatggcgacagaggaaggctgtgcttttctggcctcagctctgagctcc
aacccttcccatctgagagagctggacctgagttacaatcatctcggagactcaggggtg
aagctgctgactgctggattggatgatccacactggagactggacactctcagggtcgag
cctggtggagtccgatggttgagacaaggcttgaggaagtattcctgtgaactcacaatc
gacacaaacacagtaaacagaaacctcaaactgtgtgagagcaacaggaaggtgacacat
gtagaagaggaggagccatatcctgatcatccaaacagatttgatttctggcctcagctg
atgtgtgaaaatgctctgactggtcgctgttactgggaggtcgagtggacaggaagggct
tatatatctctgagttacagaggaatcagcaggagaggagacagggaaaactgcaggttt
ggggagaatgatcagtcctggagtctggactgttttgacagtcgtccttactccttctgt
cacaataagactgaaatgctctcctcctctcctttctactactccttcccaagcgctgtt
tactcttgcccctcctcatcccacccctcctcatcaccctcattgatctctgacagattg
gcagtgtatttggattatcctgctggctcgctgtccttctacagcgtctcctctgacacc
ctgacccacattcacaccttcagaaccacattcactgaacctctttatcctgggttcaca
gtttggtctggttcctcggtgtctctctgttctctgcaggatggagagaaaatcaggaga
ccatgcagtgtcttttcgcaggaaagagagggccttagtgaagtagtttatctttag
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integrated database retrieval system
