Trematomus bernacchii (emerald rockcod): 117487229
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Entry
117487229 CDS
T09643
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117487229 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117487229 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117487229 (chrna1)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117487229 (chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
117487229
NCBI-ProteinID:
XP_033991793
EnsemblRapid:
ENSTBNG00005006933
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
FLIIIIIIMMYLFGPVLCSEDETRLVKDLFVGYNKVVRPVEHFSEAVEVTVGLQLIQLIS
VDEVNQIVTSNVRLKQRWLDVNLKWNPADYGGIRKIRVPSADIWKPDLVLYNNADGDFAI
IQFTKVLLEHTGIIIWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGLLVVINQDS
DRPDLSNFMESGEWVLKDYRSWKHWVYYTCCPDTPYLDITYHFLMLRLPLYFIVNVIIPC
MLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTM
VFVIASIIITVIVINTHHRSPSTHTMPNWIRKVFIETIPNMMFFSTMKRPGQEIRQQRSF
PTDMDISDISGNLGPTSVPYQSPITKNPDVRSAIEGVKYIAETMKADEESNNAAEEWKFV
AMVLDHILLCVFMAVCIIGTLAVFAGRLIELNTL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
tttcttattattattattattattatgatgtatttatttggtccggtgctttgctcggag
gatgagactcgtctggtcaaagatcttttcgtcggctacaacaaggtggtgcgtccggtg
gagcacttcagtgaagctgtggaagtcaccgtgggcctgcagctcatccagctcatcagc
gtggatgaagtgaaccagattgtgaccagtaacgtccgtctgaaacagcgatggttagat
gtgaatctgaagtggaatccggctgattacggaggcatcaggaagatcagagtcccttca
gcagacatatggaaacctgacctggtgctatacaacaatgctgatggagactttgccatc
atccaattcactaaagtcctgctggagcacacggggatcatcatctggaaccctccggcc
atctttaagagttactgcgagatcatcgtgctgcacttccccttcgacctgcagaactgc
agcatgaagctggggacctggacctacgacgggctgctggtggtcatcaaccaggacagc
gaccgtccggacctcagtaacttcatggagtcaggggagtgggtgttgaaggactacagg
agctggaagcactgggtttactacacctgctgccccgacacgccctacctggacatcacg
tatcacttcctgatgctgcggctgccgctctacttcatcgtcaacgtcatcatcccctgc
atgctgttctccttcctcaccggactcgtcttctacctgcccactgactccggtgagaag
atgacgctctccatctccgtcctgctgtccctcactgtgttcctgctggtgatcgttgag
ctcatcccctccacctccagcgctgttcctctcatcgggaagtacatgttgttcaccatg
gtcttcgtcatcgcctccatcatcatcaccgtcatcgtcatcaacacacaccaccgctcg
cccagcacccacaccatgcccaactggatacgcaaggtgttcatagaaaccattcccaac
atgatgttcttctccacgatgaagcgtcccgggcaggagatccggcagcagagatcgttc
ccaacggacatggacatctccgacatctcaggaaacctcggtcccaccagcgtcccgtac
cagtctcccatcactaaaaaccccgacgtccgcagcgccatcgaaggagtgaagtacatc
gcagagaccatgaaagcagacgaggagtctaacaacgctgcagaggagtggaagtttgtt
gccatggtgctggaccacatcctgctgtgtgtgttcatggctgtgtgtatcatcgggacg
ctcgcagtgtttgccggcagactcatcgagctcaacacgctgtag
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integrated database retrieval system
