Trematomus bernacchii (emerald rockcod): 117487503
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Entry
117487503 CDS
T09643
Symbol
rnf41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117487503 (rnf41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117487503 (rnf41)
04121 Ubiquitin system [BR:
tben04121
]
117487503 (rnf41)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117487503 (rnf41)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117487503 (rnf41)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117487503 (rnf41)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117487503 (rnf41)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117487503 (rnf41)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117487503 (rnf41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_6
zf-rbx1
zf-Nse
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Sina_ZnF
U-box
zf-ANAPC11
Rootletin
SlyX
zf-TRAF
zf-RING_10
Trimer_CC
zf-TRAF_2
DFF-C
Sos7
Laminin_II
Motif
Other DBs
NCBI-GeneID:
117487503
NCBI-ProteinID:
XP_033992024
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MGYDITRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFAQQQICPVDRTVV
TLAHLRPVPRIMRNMLSKLQISCDNAGFGCGATLRLDQLTSHLKDCQHNPKRPVSCEEGC
GLEMPKDEVPNHNCIKHLRTVVGQQQTRISDLEKTVTEHKHQLGEQKRDIQLLKAYMRAI
RSANPNLQNLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgacattacgaggttccaaggggaggtggatgaagacctgctgtgccccatc
tgcagtggagtgctggaagaaccagtgcaggctcctcactgcgagcatgccttctgtaac
gcctgtataacccagtggtttgcgcagcagcagatatgccccgtggaccgcaccgtggtg
acgctggctcacctgcggcccgtgccccgcatcatgcgtaacatgctgtccaaactgcag
atcagctgcgacaacgcgggcttcggctgcggcgccacgctgcgtctggaccagctgacg
tcacacctcaaagactgccagcacaaccccaagagacccgtgagctgcgaggagggctgc
gggctggagatgcccaaagacgaggttcctaaccacaactgcatcaaacacttacggacg
gtggtcggtcagcagcagaccaggatctcagacctggagaagaccgtgacggagcacaaa
caccagctgggggagcagaagcgggacatccagctgctgaaggcgtacatgagggcgatc
cgcagcgccaaccccaacctgcagaacctggaggagagcatagagtacaacgagatcctg
gagtgggtgaactccatgcagccggcgcgggtcactcgttggggggggatgatctccact
ccggacgccgtgctgcaggcggtcatcaagcgctctctgatcgacagcggctgcccgctc
tccatcgtcaacgacctgatcgagaacgcccacgagaggaactggcctcagggcctcgcc
acgctggagacgcggcagatgaaccggcgatactacgagaactacgtggccaagcggatc
cccgggaagcaggcggtggtggtgatggcctgcgagaaccagcacatgggcgaagacatg
atcctggagcccggactcgtcatgatcttcgctcacggagtcgaggagatcttataa
DBGET
integrated database retrieval system
