KEGG   Trematomus bernacchii (emerald rockcod): 117487558
Entry
117487558         CDS       T09643                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tben03009]
    117487558 (wdr18)
Ribosome biogenesis [BR:tben03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    117487558 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_alt Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_Nup120_160 WDR54 KNTC1_N Beta-prop_IP5PC_F WDR93
Other DBs
NCBI-GeneID: 117487558
NCBI-ProteinID: XP_033992098
LinkDB
Position
Unknown
AA seq 428 aa
MAAPLEVIVSSDSGSQMWNSTVFDLLSGSSLLSYRGGSSSARGLTLLSGGYLLCAQLGKN
FINVWEIQRKDQLQQKIVCPGVITCLTASPDGLFLAAGVAEGIYLWEVSTGKLLSVLNRH
YQDVTCLKFTDDSSHFISGGKDNMALVWSLCSVIQLDLNAPPEPRHILSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELSSGELLLSVLFDVEIMSVTFDPSEYFLFCGGSDGNIF
QVSLCSQSLSREKSFQSDSDGDTTFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWDIQS
KQSIRSLAHKGPVTNAVIMAAPANMFLPDSRPAVPLPRFSRHLQASEGGGASEVCVRPAL
YTQEEELTYMQKADMLNLLMNAVTDKSVYGDGENTKVRVSELEEEVQTLKKVNKDLYEFT
SQLLTKPT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcggcccctctggaggtgatcgtgagcagcgactctggctctcagatgtggaacagc
accgtgttcgacctgctcagcggctccagcctgctctcctaccggggagggagctcctct
gcccgggggctcactctgctcagcggggggtacctgctctgcgcgcagctggggaagaac
ttcatcaacgtgtgggagatccagaggaaggaccagctgcagcagaagatcgtgtgtcca
ggtgtgatcacctgtctgaccgcctcacctgacggactctttctcgctgctggggtggct
gagggcatttacctgtgggaggtgtccacaggtaagctgctgtcggtgctgaaccgtcac
tatcaggacgtcacgtgtctgaagttcaccgacgacagcagccacttcatatctggagga
aaagacaacatggctctggtgtggagtctgtgcagtgtgatccagctggatttgaacgcc
cccccagagcctcgtcacatcctgtcccgtcactctctaccaatcacagacctgcactgc
ggcctgatgggagctcaggctcgcgtcgccaccgcctccttagaccagaccgtcaaggtg
tgggagctgtcctcaggtgagctgctgctctccgttctgtttgacgtggagatcatgtcg
gtgaccttcgacccctcggagtacttcctgttctgtggaggcagcgacgggaacatcttc
caggtctcactctgcagccagagtctcagccgggaaaaatcatttcagtcggacagcgac
ggagacacgaccttcaaaggacacaggaacttggtgacgtgtctctcggtgtcgatggac
ggcacgctgctgctctcggggtcacatgacgagacggttcgactctgggacatccagagc
aagcagagcatccgctccctcgcacacaaaggtccggtgacgaacgctgtcatcatggcg
gctccagcgaacatgttcctccccgacagtcgtccggccgtccctctgccgaggttcagc
cgacacctgcaggcctctgaagggggcggggcctcagaggtgtgtgtccgccccgcgctc
tacacacaggaagaggagctgacgtacatgcagaaagctgatatgctgaacttgttgatg
aacgctgtgacggacaagtcggtgtacggagacggggagaacacgaaggttcgagtctcc
gagctggaggaggaagttcaaactctgaagaaagtcaacaaagatctttacgagttcacc
agccagctgctcaccaaacccacataa

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