Trematomus bernacchii (emerald rockcod): 117487558
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Entry
117487558 CDS
T09643
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117487558 (wdr18)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
117487558 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_alt
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_Nup120_160
WDR54
KNTC1_N
Beta-prop_IP5PC_F
WDR93
Motif
Other DBs
NCBI-GeneID:
117487558
NCBI-ProteinID:
XP_033992098
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAAPLEVIVSSDSGSQMWNSTVFDLLSGSSLLSYRGGSSSARGLTLLSGGYLLCAQLGKN
FINVWEIQRKDQLQQKIVCPGVITCLTASPDGLFLAAGVAEGIYLWEVSTGKLLSVLNRH
YQDVTCLKFTDDSSHFISGGKDNMALVWSLCSVIQLDLNAPPEPRHILSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELSSGELLLSVLFDVEIMSVTFDPSEYFLFCGGSDGNIF
QVSLCSQSLSREKSFQSDSDGDTTFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWDIQS
KQSIRSLAHKGPVTNAVIMAAPANMFLPDSRPAVPLPRFSRHLQASEGGGASEVCVRPAL
YTQEEELTYMQKADMLNLLMNAVTDKSVYGDGENTKVRVSELEEEVQTLKKVNKDLYEFT
SQLLTKPT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctctggaggtgatcgtgagcagcgactctggctctcagatgtggaacagc
accgtgttcgacctgctcagcggctccagcctgctctcctaccggggagggagctcctct
gcccgggggctcactctgctcagcggggggtacctgctctgcgcgcagctggggaagaac
ttcatcaacgtgtgggagatccagaggaaggaccagctgcagcagaagatcgtgtgtcca
ggtgtgatcacctgtctgaccgcctcacctgacggactctttctcgctgctggggtggct
gagggcatttacctgtgggaggtgtccacaggtaagctgctgtcggtgctgaaccgtcac
tatcaggacgtcacgtgtctgaagttcaccgacgacagcagccacttcatatctggagga
aaagacaacatggctctggtgtggagtctgtgcagtgtgatccagctggatttgaacgcc
cccccagagcctcgtcacatcctgtcccgtcactctctaccaatcacagacctgcactgc
ggcctgatgggagctcaggctcgcgtcgccaccgcctccttagaccagaccgtcaaggtg
tgggagctgtcctcaggtgagctgctgctctccgttctgtttgacgtggagatcatgtcg
gtgaccttcgacccctcggagtacttcctgttctgtggaggcagcgacgggaacatcttc
caggtctcactctgcagccagagtctcagccgggaaaaatcatttcagtcggacagcgac
ggagacacgaccttcaaaggacacaggaacttggtgacgtgtctctcggtgtcgatggac
ggcacgctgctgctctcggggtcacatgacgagacggttcgactctgggacatccagagc
aagcagagcatccgctccctcgcacacaaaggtccggtgacgaacgctgtcatcatggcg
gctccagcgaacatgttcctccccgacagtcgtccggccgtccctctgccgaggttcagc
cgacacctgcaggcctctgaagggggcggggcctcagaggtgtgtgtccgccccgcgctc
tacacacaggaagaggagctgacgtacatgcagaaagctgatatgctgaacttgttgatg
aacgctgtgacggacaagtcggtgtacggagacggggagaacacgaaggttcgagtctcc
gagctggaggaggaagttcaaactctgaagaaagtcaacaaagatctttacgagttcacc
agccagctgctcaccaaacccacataa
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