Trematomus bernacchii (emerald rockcod): 117487597
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Entry
117487597 CDS
T09643
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117487597
09143 Cell growth and death
04210 Apoptosis
117487597
09144 Cellular community - eukaryotes
04530 Tight junction
117487597
04540 Gap junction
117487597
09142 Cell motility
04814 Motor proteins
117487597
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117487597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117487597
03036 Chromosome and associated proteins [BR:
tben03036
]
117487597
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117487597
04147 Exosome [BR:
tben04147
]
117487597
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117487597
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117487597
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117487597
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117487597
Exosomal proteins of other body fluids (saliva and urine)
117487597
Exosomal proteins of colorectal cancer cells
117487597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117487597
NCBI-ProteinID:
XP_033992109
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGRKPGDQNISGGVDDSYNTFFSETRAG
KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYAIGKEVIDLVM
DRIRKLSDQCTSLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVST
AVVEPYNAILTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLMSQLVSSITASL
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPANQL
VKCDPRHGKYMACCILYRGDVVPKDVNAANATIKTKRSIQFVDWCPTGFKVGINYQPPTV
VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGELSEAR
EDMAALEKDYEEVGADSLEDEDEEGEEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcctctcaatccacgttggtcaggctggtgtgcagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggcaggaagcctggtgaccag
aacatctcaggaggagtggacgattcctacaacaccttcttcagtgagactagagctgga
aagcacgtccccagagcagtgtttgttgacctggagcccactgtcatcgatgaggtgcgc
acggggacttaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgct
gccaacaactacgcccgaggacactacgccatcggcaaggaggtcatcgacctggtgatg
gacagaatccgaaagctgtccgaccagtgcaccagtcttcagggtttcctggtgttccac
agcttcggagggggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtc
gactacggcaagaagtccaaactggagttctccgtctacccagctccccaggtgtccacc
gctgtggtggagccctacaacgccatcctgaccaccctggagcactctgactgtgccttc
atggttgataatgaagctatttatgatatctgccgtagaaaccttgatatcgagcgtccc
tcttacacaaacctgaacaggttgatgagtcaacttgtgtcctccatcactgcctccctt
cgttttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtgccctac
ccccgtatccacttccctctggccacctatgcccctgttatttctgcagagaaagcttac
catgagcagctctcagtggcagaaatcactaattcctgcttcgagccagccaatcagttg
gtgaaatgtgacccacgccacggtaaatacatggcctgctgcattttgtatcgtggtgat
gtcgttcccaaagacgtgaacgctgccaatgccaccatcaaaaccaagcgctccatccag
tttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgcccactgta
gttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaacaccact
gctattgcagaggcctgggctcggctggaccacaagtttgatctgatgtacgctaagcgt
gcctttgtgcactggtatgtgggtgagggtatggaggagggagagttatctgaggccagg
gaggacatggccgctctggagaaagattatgaggaggttggagctgatagcctggaagat
gaggatgaggaaggagaggagtattag
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