Trematomus bernacchii (emerald rockcod): 117487599
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Entry
117487599 CDS
T09643
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117487599
09143 Cell growth and death
04210 Apoptosis
117487599
09144 Cellular community - eukaryotes
04530 Tight junction
117487599
04540 Gap junction
117487599
09142 Cell motility
04814 Motor proteins
117487599
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117487599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117487599
03036 Chromosome and associated proteins [BR:
tben03036
]
117487599
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117487599
04147 Exosome [BR:
tben04147
]
117487599
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117487599
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117487599
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117487599
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117487599
Exosomal proteins of other body fluids (saliva and urine)
117487599
Exosomal proteins of colorectal cancer cells
117487599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117487599
NCBI-ProteinID:
XP_033992111
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGRKPGDQNISGGVDDSYNTFFSETGAG
KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEVIDLVM
DRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVST
AVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLMSQLVSSIT
ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPA
NQLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKCSIQFVDWCPTGFKVGINYQP
PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWCVGEGMEEGEFS
EAREDMAALEKDFEEVGADSLEDEDEEGEELY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcctctcaatccacgttggtcaggctggtgtgcagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggcaggaagcctggtgaccag
aacatctcaggaggagtggacgattcctacaacaccttcttcagtgagactggagctgga
aagcacgtccccagagcagtgtttgttgacctggagcccactgtcatcgatgaggtgcgc
acggggacttaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgct
gccaacaactacgcccgaggacactacaccatcggcaaggaggtcatcgacctggtgatg
gacagaatccgaaagctgtccgaccagtgcaccggtcttcagggtttcctggtgttccac
agcttcggagggggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtc
gactacggcaagaagtccaaactggagttctccgtctacccagctccccaggtgtccacc
gctgtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactctgac
tgtgccttcatggttgataatgaggctatttatgatatctgccgtagaaaccttgatatc
gagcgtccctcttacacaaacctgaacaggttgatgagtcaacttgtgtcctccatcact
gcctcccttcgttttgatggtgccctcaatgttgatctgacagagttccagaccaacttg
gtgccctacccccgtatccacttccctctggccacctatgcccctgttatttctgcagag
aaagcttaccatgagcagctctcggtggcagaaatcactaattcctgcttcgagccagcc
aatcagttggtgaaatgcgacccacgccacggtaaatacatggcctgctgccttttgtat
cgtggtgatgtcgttcccaaagacgtgaacgctgccattgccaccatcaaaaccaagtgc
tccatccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccg
cccactgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagc
aacaccactgctattgcagaggcctgggctcggctggaccacaagtttgatctgatgtac
gctaagcgtgcctttgtgcactggtgtgtgggtgagggtatggaggagggagagttctct
gaggccagggaggacatggccgctctggagaaagatttcgaggaggttggagctgatagc
ctggaagatgaggatgaggaaggagaggagctttattga
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