Trematomus bernacchii (emerald rockcod): 117487713
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Entry
117487713 CDS
T09643
Symbol
tmtops3a
Name
(RefSeq) teleost multiple tissue opsin 3a
KO
K04256
c-opsin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117487713 (tmtops3a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tben04030
]
117487713 (tmtops3a)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117487713 (tmtops3a)
G protein-coupled receptors [BR:
tben04030
]
Rhodopsin family
Vision
Opsin
117487713 (tmtops3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
117487713
NCBI-ProteinID:
XP_033992256
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MVVDTRGCNFSTTDSSACGSSLGGLSRTGHTVVAVCLGFILVTGILNNGLALLIFAKFRC
LWTPINVILLNISLSDVLVCVFGTPLSFAASVHGRWLIGESGCKWYGFANSLFGIVSLVS
LSVLSYERYTAVLLSSRVDISDFRKCWLCVGGSWLYSLLWTLPPLLGWSSYGPEGPGTTC
SVQWHLRSPSSVSYVLCLFIFCLLLPLLVMIYSYGRILVAIRRVGKINLLAAHRREQHIM
AMVLSMVSCYMLCWMPYGIMALVATFGRSGLVTPVVSVVPSVLAKFSTVINPIIYVFFNN
QFYRCLVAFMKCSGEPQSLHGKENPTARTTLSGFFPVHRQASLSSSQRQILSQHNDQHTL
VVHYTP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcgacacacgcggctgtaacttcagcaccacagacagttccgcgtgcggctct
agcctgggcgggctgagccggaccggccacacggtggtggcagtatgcctcggattcatc
ttggtgacgggaatcctcaacaatggcctcgctcttcttatctttgcaaagtttcgctgc
ctttggacgccgatcaatgtcatcctgttgaacatcagtctgagcgacgttctcgtgtgt
gttttcggcacaccgctcagtttcgctgcgagtgtgcacgggagatggctcattggagag
tccggctgcaagtggtacgggttcgcaaattccctctttgggattgtgtccctggtgtcc
ttgtctgttctctcctatgagcgctacaccgccgtgctgctttcctcccgggtcgacatc
tcagacttcaggaagtgctggctctgtgtggggggctcctggctctactctctgctctgg
accctgccacccctcctgggttggagcagctatgggcccgagggacccgggactacatgc
tctgtccagtggcacctccgttcacccagcagcgtctcatacgtgttgtgtctcttcatc
ttctgcctgctgctgccccttctggtgatgatctactcttatggcaggatcctggtggca
atcaggagggtgggtaagatcaatctgctggcagcccatcgcagagagcagcacattatg
gcgatggtgttatccatggtgtcctgctacatgctgtgctggatgccctatggcatcatg
gcgctggtggccacctttgggaggtcggggctggtgacccccgtggtcagcgtggtgccc
tccgtcctggccaagttcagcaccgtcatcaaccccatcatctacgtgttcttcaacaac
cagttttatagatgcttggtggccttcatgaagtgcagcggagaaccccagtctcttcac
ggaaaggagaacccaactgcgaggacaaccttatctgggttcttcccagtccacagacaa
gcctccctcagctcctcccagcgtcagatcctcagccagcacaatgaccaacacactctc
gttgtccactacaccccatag
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