Trematomus bernacchii (emerald rockcod): 117487717
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Entry
117487717 CDS
T09643
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117487717 (fxr2)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117487717 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
117487717 (fxr2)
mRNA cycle factors
Stress granule specific factors
117487717 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
117487717
NCBI-ProteinID:
XP_033992258
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPAEYLKEIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPLNPNSP
SSRSSFHKVPIPVPEDLRDICESENIHKDFRKAIGANCIFYSTESHELIVLSTNETTVKR
ATLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIGSHGAN
IQQARKVAGVTAIELEEESCTFRIYGESPEAVRQAREFLEFKEDYFHVPRDLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKPREEGGRQGAGRDDTAPVKEGMVPFVFVGTKENIS
NAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPASRTGGPGVEREKGYLTDDS
SNSLHTSRTYGGRGRGRRTSNSQYSGYGTNSELSNTSETEELGDREQRPRGLGADERGSR
RGGRGRGTNTGRGRGGPGAKPSNSISSVLRDPDSNPYSLLEGEGEQAESDIVDGVADRRR
RSRRRRNDQEPSVMDAAAESDGQAAPSENGLDDEARPQRRNRSRRRRNRGNRPEGGSASR
DRQTAEGVTVADYISRAESQSRQNLPQKENHAGSEPKENGTSDTKDERTPSMGSPKGMSS
ASETLTLVNGVS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggctcgaatggggccttctacaagggcttcatc
aaagatgtccacgaagactcactcacaattgtttttgaaaacaactggcagccagaaaga
cagttgcccttcagcgacgtacggttgcctcctccagccgaatacctcaaggaaatcggt
gaaggggaagaagtggaggtttactcgagggccaacgaacaggagccatgtggctggtgg
ctggcccgggtcagaatgatgaagggagagttctacgtgatcgaatacgcggcatgcgac
gctacatacaacgagattgtcacagcagagcgcatcaggcccctcaaccccaacagccca
tcctctcgaagctccttccacaaggtccccatccctgtcccagaagacctgagggacatc
tgtgagagcgagaacattcacaaagacttcaggaaagctatcggagctaactgcatcttc
tacagtaccgaatcacacgaactcatcgtgctgtctacaaacgaaaccacagtaaagcgt
gcaacactcctgagcgacatgcatttccgtagcatccgtaccaaactcatgctaatgtcc
cgcaacgaggaagccaccaaacatcttgagacaagtaagcagttagcatcagcgtaccag
gaggaggtgaaggtcagggaggacctgatgggacttgccatcggttcccacggcgccaac
atccagcaggccaggaaggtggctggagtcacagccattgagttagaggaggagagctgc
acgttcaggatctacggagagtccccagaggcagtaaggcaggctagagagtttctcgag
ttcaaagaagactactttcacgtaccgagggacctcgtaggcaaagtcatcggcaagaac
ggcaaagtcattcaggagattgttgacaagtcaggcgtggtccgcgtcaggatcgaggga
gacaacgacaaaaagccccgagaggagggaggcaggcagggggcaggcagggacgacact
gcccccgttaaagagggcatggttcccttcgtctttgtgggaactaaagagaacatcagc
aatgctcaggctctgttggagtaccatgtgtcctatctccaggaggtggagcagctgcgc
ctggagcgtctccagattgacgagcagctccgtcagatcggggttggttaccgcgctcct
gctagccgaactgggggccccggtgttgaacgggagaaaggttacttaacagatgatagc
agcaactcactccacacctctcgcacctacggaggccgcggcagagggcgtaggacctca
aacagccagtactctggatatggcacaaactctgagctgtccaatacttctgagacagag
gaattgggcgatcgcgaacagcggccccgtggcttaggggccgatgagcgaggatcccga
cggggcggcaggggccgaggcacaaacacaggacgaggccgtggggggccaggggccaag
ccttccaactccatcagctcagtgctgagggacccggacagtaacccgtactccctgctg
gaaggcgagggagagcaggccgaatctgacattgttgacggtgtggcagaccgccgcaga
cgctccagacgtcgccgtaacgaccaggagcccagcgtgatggatgctgccgcagagtca
gacggccaggccgcccccagtgagaacgggctggatgatgaagcccgacctcagcgccgc
aaccgaagccggcgccgtcgcaaccgtggcaaccgcccagagggaggttcagccagccgt
gacagacagacagctgaaggtgtgactgttgctgactacatatcccgtgctgagtcccag
agcagacagaacctgccccagaaggaaaaccacgctggctccgagcccaaggagaacggg
accagcgacacaaaggatgagcgaacgccctccatgggttcccccaaaggcatgagctcg
gccagcgagaccctgaccttggtcaacggggtctcgtaa
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