Trematomus bernacchii (emerald rockcod): 117487747
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Entry
117487747 CDS
T09643
Symbol
chrnb1l
Name
(RefSeq) cholinergic receptor, nicotinic, beta 1 (muscle) like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117487747 (chrnb1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117487747 (chrnb1l)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117487747 (chrnb1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117487747
NCBI-ProteinID:
XP_033992292
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MIGPMKMRTIIHARMNALIIVCSCLCITFTGASDIEKLLHQKLFKNYNMKVRPARNWEDK
VMVRVGMTLSQLVSLNEKNEEMTTNVFMNMAWIDYRLSWKPEEYDDIAVLRIPPNKVWRP
DIYLINNNDGQFDVALYVNVLVYSDGTVNWLPPAIYRSSCSIEVSYFPFDWQNCSMVFRS
YTYDASEVELQYFLDEENKEIQEIVIDENAFTENGEWAICHKPSRKHIKEDLYEDITFYL
IIERKPLFYIVNIIMPCILTMVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLADRVP
ETSLGIPIIVNYVMFTMILVTFSVILSVVVINLHHRTPSTHIMPNWVRTVFIHFLPKYIG
MARPKPEEPMLKEDSSDDSPNPFFNGRQPGGEYFFRKINPDLVLPWRERSESPVQLQRLP
NTDRFCLILPPHLKSAIAAVTYMAEQLKKQDTEDTITGDWQYIALVADRLFFWLFVIITT
LGTLAMFLDASFNYTPDNPFP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattggaccaatgaagatgaggacgatcattcatgcaaggatgaacgcattgatcatc
gtatgcagctgcctttgcatcacttttaccggagcctcggatatagaaaagttgctccat
cagaagctcttcaagaactacaacatgaaagtcaggcctgctcggaactgggaggataag
gttatggtacgagtgggaatgacgctctctcagcttgtcagcttgaatgagaagaacgaa
gaaatgacgaccaacgtgttcatgaatatggcatggatagactacaggttatcatggaaa
cctgaggaatatgacgacattgcagttttgaggattcctccgaacaaggtgtggcggcct
gacatctacctcattaacaataatgatggccagtttgacgtggctctgtacgtcaacgtc
ttggtttacagtgatgggacagtcaactggcttcccccagccatctaccgcagctcctgc
tctatagaggtatcgtactttccatttgactggcagaattgcagcatggttttccgctcg
tacacctacgacgcctctgaggtggaactgcagtactttctggacgaggaaaataaagag
attcaggagattgttattgatgagaacgctttcactgaaaacggagaatgggcaatctgt
cacaaaccctccagaaagcacattaaggaggacttgtacgaggacatcactttctacctc
attattgagaggaagcctcttttctacatcgtcaacatcatcatgccctgcatcctcacc
atggtgttggctatatttgtcttctacctgcctcctggagcaggagagaagatgactctt
tccatttcggttctcatcgctctgactgttttcatgctcttattggcggacagggtccct
gagacttcccttggaatcccaataattgtcaactacgtcatgttcaccatgatcctggtt
actttctctgtcatcctaagtgttgttgtcatcaatttacaccaccgaacgcccagtaca
cacattatgcccaactgggttcgaacggtattcattcacttcctgcctaagtacatcggc
atggcaaggccaaaaccagaagaacctatgttgaaagaagattctagtgatgactctccc
aacccattcttcaatggtaggcagcctggaggagagtacttctttcgcaagatcaaccct
gatctcgtcctgccgtggagagaaaggtctgagagcccagtgcagctccagcggctcccg
aacactgaccgcttttgtctgatcctccccccccacctgaagtcagccatcgctgcggtg
acatacatggccgagcagctaaagaagcaggacacggaggacacgataacaggagactgg
cagtacatcgccctcgtggcggaccgcctcttcttctggctgtttgtcatcatcaccacg
ctgggcaccttggccatgttcttggacgccagttttaactacacccccgacaaccccttc
ccatag
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