Trematomus bernacchii (emerald rockcod): 117487749
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Entry
117487749 CDS
T09643
Symbol
atg2a
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04136
Autophagy - other
tben04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117487749 (atg2a)
04136 Autophagy - other
117487749 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117487749 (atg2a)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117487749 (atg2a)
Membrane trafficking [BR:
tben04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117487749 (atg2a)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117487749 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
BUD22
CCD97-like_C
CPSF100_C
DUF4611
CDC45
TLP-20
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
117487749
NCBI-ProteinID:
XP_033992297
LinkDB
All DBs
Position
Unknown
AA seq
2021 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLGLDLYNGSGVIKEINLDVWAVN
ELLESLGAPLEIVDGFVNTITVTIPWQALLTDHCTLEVSGLQITCRPKYRTSGGWDSQGW
SSSMTSSMQLAQECLKDPPEASEEPPPQLEGLEMFAQTIETVLRRIKVTFIDTIVRIEHQ
PLDLETGVALEMHIKRLEYFDEAVRDPASQTAVPVDIHQPPAFLHKILQLSAVQLFYDST
GTVQGPLKQQHPESATASEGEEEEEEEEEEEEEEEEEEEGDENEEEDEEKAKPLKSPPCP
PSQPLLIGSCSGFIETTVKIKQNDMLPGPKFELDGKVGCVHMLLSPDQITHLTDLLAALC
IDTETDTKCDGALSRPLDSDDLRLIEEDLSKQLGSSPRDREWETEPDLDPYVTCQENGEM
FFSMCPAGMSSSVTSVRSGSEFSDSDMESSTHSLSSFTQPASLSAQGMGNGPRRHPVAGC
LSSLPQASGRTRGRSHSGAEQLKPDALLRLTLGGLTLTLLQEDPPSNPDEATSLAQVSRV
FFRELAFFKDSMFSERDFHHLRGGFAKACPQSHLRVTGAAVQVACEMRSGSRHNRAVTSD
LSFSRLELLECLWEDGKPQYSELLQFQKAGLFTVGAAARPCAQLHYGLTEKHMRKGKQRV
VRRDSVVRVELAELSAELDLDILTRLGNLSKAFAHCPTDTAAPGLMQTQSSELYSSFSLL
SPHAILRLRFPIPDLRPLPKRRPPTQRAVRQETLVLELTELELKHQEAPDLQSEQPAVGE
PWAPCLTQLLEASFTDLHGSYEGWEGGSFPFIRVKKNRDSSPRISVRVRGGDPQGPAAGL
GGMNLISDLGAAFFESHCEINDKTSSPFSSNRTMFETEEMVIPADPEEMRQFQAQCVAQC
QCAVDIHLPLAYILLPSKQAFQSFYNRINNDLLMWEPPPPSASSPDHSRQHHEEFQLCKS
AFRLDSDSDEDDPQFFLASDSSGKTKAPRPKHNLSLLSLTVIISKGRLQTRTDKKEDQSH
GEIVLDLEGGKIFSVAQHQNDPNLNFLCIESRRVELYHKAVVKDTPIPQRLEIPKFNPPK
HLDPTIYPTEVGVSSVSGKEGELQMLSTAIKVTLDPQRGVKEFLVALRLQGATMRHYMAP
TNHSWHEQLVDFLDVIDDPILGYTAPAVITVLHTHLATCAVDYRPMYLPLRVCSQRKSFS
LSSNIIVDTATFHLRFILDDSALYLSDKCETDVVDLRRDYVCVLDIDLLELAITTWKGSD
TGKLSQPLFELRCSNNVVHVHTCADSCAALVNLLQYLVSQGDLHPPPRHTSPTEIAGQKL
PLSESPAAMLPCPPAETAEINQYDLADALIDTEKSHREESSDPGSPSMPRGSPVSVYLFP
GEAPKRSPSVLLVEDAELDGLVATATEAQADMMSEEGSDGSTDNDDFCILEAPGMGIPPR
DGEPVVTVLSEGPIKLKESHFSRPRGSSDLLRAPSRFPVPQSRVVLREISVVWHLYGGKD
FGGKPMSIHAQNTNRGRSAPAGVRGSPSRSATTSRPQNSWRWAGGSGRQHQLLMEIQLTK
VSFQHESYPGAVAGQEGEGFLLAGVGPGGEQPLSRQVFIVQELEVRDRLASSQLNKFLYL
YTSESMPRRAHSNMLTVKALQVCPESGLGGPECCLRISLLPLRLNIDQDALFFLKDXFSS
LASYVNPYLPVDPASEVKADPSQKAPEEAEAGLGPDLSASVETTFSEQSSSSAGSTSSSS
SDQPIYFREFRFTSEVPIWLDYQGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGL
LGVDKVIQYAVTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGRI
IRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLNRFAITEGRAPSS
RPRRAAQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPT
VVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTDGQE
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccctggtcaggctcaatcaagaagcgggcctgtcggtacctc
ttacagcactacctcggccactttctgcaggaaagactgagcttggaccagctgggtttg
gacctgtacaacggcagcggtgtcatcaaggaaatcaacctcgatgtctgggcggtcaat
gagcttttggagtctcttggggctcctctggagatagtggatggctttgtgaacaccata
acagtgaccataccctggcaagctctcctgactgatcactgcactttagaggtttctggt
ctccagataacatgtcgacccaagtacaggaccagtgggggatgggactctcaaggctgg
tcatcaagcatgacctccagcatgcagctggctcaggagtgcctgaaggaccccccggag
gcttcagaggagcccccgccccagctggaggggctggagatgtttgcacaaaccattgag
acagtccttcgtcgtattaaagtcaccttcatagacactatcgttcgcatcgagcaccag
cccctggacctggaaacaggcgtggccttagagatgcacatcaaacggctggagtacttt
gatgaggccgtgcgagatccagccagtcagacggccgtgcctgtggacatccaccagccg
cccgccttcctgcacaagatcctccagctgagcgccgtgcagctgttctacgacagcacc
ggcacagtacagggtcctcttaagcagcaacaccctgaatcagcaacggcaagtgaagga
gaggaggaggaggaagaggaagaggaagaggaggaggaggaggaggaggaagaagaagga
gatgaaaatgaggaggaagatgaagagaaggcgaagcccctgaaatcccctccctgccct
ccgtctcagccgctgctcataggaagctgttccggtttcatcgagaccaccgtcaagatc
aaacagaacgacatgctgcctggaccaaagtttgagttggacggcaaggtgggctgtgtc
cacatgctgctgtctccagatcaaataacccacctgacagacctgctggcagccctctgc
atagacaccgagacagacactaagtgtgatggagccctcagtcggcccttggactcagac
gacctgcgtctgattgaggaggacctcagtaagcagctgggctccagtcccagagacaga
gagtgggaaactgagcccgacctggacccctacgtcacctgccaggagaatggagagatg
tttttctccatgtgtcctgctggaatgagcagtagcgtgacgtctgtgcgctctggcagc
gagttctcagacagcgatatggagtcctcgacacacagtctgtccagcttcacacagccg
gcatcactgtctgcacagggcatggggaacggtcccaggaggcatcctgtagcgggctgt
ctgtcgagtctaccccaggcaagcggccggaccagaggacgctcccacagcggagcggag
cagctgaagccggatgctctgctgcgtctgacactcggtgggctcaccctcaccctgctg
caggaggacccgccctctaatcctgacgaagccacgtcgttggctcaggtgtctcgggtg
ttcttccgagagctggccttctttaaggacagcatgttcagcgagagggacttccaccat
ctgagaggcggcttcgccaaggcctgcccacaatcccatctcagagtgacaggcgcagca
gtgcaggttgcttgtgagatgcggagtgggtcacgtcacaaccgggccgtgacctctgac
ctttccttcagcagactggaactgttagagtgcctctgggaggacgggaagccccaatac
agcgagctgcttcagttccagaaagccggtctgttcacagttggagctgcagccagacca
tgtgcccaactacactacggcctcactgagaaacacatgcgtaaaggtaaacagcgagtg
gtgcggcgggacagtgtagtgcgggtagagctggcagagctgagcgctgagctcgacctg
gacatcctcactcgcctggggaacctgagcaaggccttcgcccactgtcccacagacact
gctgcgccgggactcatgcagacccagagcagcgagctgtactcctccttctccctcctc
tccccacacgccatcctcaggcttcgtttccccatacccgacctgcggcccctccctaag
cgtcgccctcctacccagagggcagtgcggcaggagactctcgtgctggagctgacggag
ctggagctgaagcaccaggaggccccggacctccagagcgagcagcctgcggtgggggag
ccgtgggccccctgcctcacacagctgctggaggcctccttcactgacctgcatgggtca
tacgagggctgggagggcggctctttcccctttatcagagtgaagaagaaccgcgactct
tcaccgaggatatcggtgcgtgtgcgtggaggggaccctcagggcccggcagcaggtctg
ggggggatgaacctcatcagtgacctgggggccgccttcttcgaaagtcactgtgaaatt
aacgacaaaaccagctccccgttctcctccaaccgcaccatgtttgagactgaggagatg
gtgattccagccgaccccgaggagatgcgtcagtttcaggcgcagtgtgtcgctcagtgt
cagtgtgcggtggacatccacctgccgctggcctacatcctcctgcccagcaaacaggcc
ttccagagcttctacaacaggatcaataatgatctgttgatgtgggagccgccccccccc
tccgccagcagccccgaccacagccgccagcaccacgaagagttccagctctgcaagtcg
gcctttagactggactctgattcagacgaggacgaccctcagttcttcttggccagtgat
tcatctggaaagacaaaagctccccgtcccaaacacaacctcagcctcctctccctcact
gtgatcatcagcaaagggcgcctgcagaccagaacagacaagaaggaggaccagagtcat
ggggaaattgtgcttgacctggaaggggggaagatattcagcgtggcgcagcaccagaac
gatcccaatctcaatttcctgtgtatagagagccgacgagtggaactataccataaagcg
gtggtgaaagacacccccatcccacagcggttggaaatacccaaattcaatcccccaaag
cacttggaccctaccatctaccccacagaggtgggggtgagcagtgtgagcggaaaggag
ggggagttacagatgttgtccacagccatcaaagtcacactggacccacagaggggtgtt
aaggagttcctagttgcccttcgacttcaaggtgccaccatgagacactacatggcaccg
accaatcacagctggcatgagcagctggtggactttctggatgtcattgatgatcccatt
ctgggatacacagcccccgccgtcatcactgtcctccacactcacctcgctacctgtgcg
gtcgactacagacctatgtacctgccgctgcgcgtgtgttcacagcggaagtccttctct
ctgtccagtaacatcatcgtagacacagccacctttcacctcagattcatcttggatgac
tctgctctctacctctctgacaaatgtgagactgacgttgtggacttgaggagagactat
gtgtgtgttctggacattgacctgctggagctcgccatcaccacatggaaaggcagcgat
acgggcaagctgtctcagcctctcttcgagctccgatgctccaacaatgtggttcacgtt
cacacctgtgctgattcctgcgccgccctggtcaacctgctgcagtacctcgtctcgcag
ggggacctgcaccccccgccgcgacacacctcacccaccgaaatcgctggccagaaatta
ccactgtcagaaagtcctgcggcgatgctgccctgccctccagctgaaactgcagagatc
aaccagtacgacctcgctgatgccttaatcgacacggagaagagccaccgagaagagagc
tcagatcctggttcaccctccatgcccagaggctcgcccgtctccgtctacctgttcccg
ggcgaggccccgaagcgaagcccctccgtcctgctggttgaggacgctgagcttgatgga
ctggttgccacagcaacagaggcgcaggcagatatgatgtccgaggaaggatccgacggc
tcgaccgacaacgatgacttctgcatattggaggcccctgggatgggcattcctccgcgg
gacggggagcccgtggtgacggtgttgtccgagggccccatcaagctgaaggagagtcac
ttctccagaccccgaggcagctcagacctgctgcgggcgccgagccgcttccccgtgccg
cagagcagagttgtgctgagggagatctccgtggtctggcatctctacgggggcaaggac
tttgggggcaagcccatgtcaatacatgcccaaaacactaacagaggtcgttcagccccc
gctggagttcggggttccccgtctcgctcggccaccacctcccgtccccagaactcgtgg
cgctgggccggaggcagcggccgccagcaccaactgttgatggagatccagctcaccaag
gtgtccttccagcatgagtcctatccaggggcagtagcggggcaggagggggaggggttc
ctgttggctggcgtgggtcctgggggcgagcagcccctctccagacaggtgttcatcgtc
caggagctggaggtccgagaccgactggcctcatcacaactcaacaaattcctttacctc
tacaccagcgagagcatgccgcgccgagcccactccaacatgctgacggtgaaggccctg
caggtctgtccagagtctggcctcggtggaccggagtgctgtcttcggatcagcctgctg
cctctacgtcttaacatcgaccaggacgcactgtttttcctgaaggacnttttcagcagt
ctagcttcctatgttaacccttacctgcctgtggaccctgcatccgaagtgaaagcagac
ccctcccagaaggcccctgaggaggcggaggctggtctgggacctgacctctcagcgtct
gttgaaaccaccttcagcgagcagagctcctcctctgccggctccacctcctcctcttcc
tccgaccagcccatctacttccgggagtttcgattcacctctgaagtgcctatctggctt
gactatcaaggcaaacatgttgtcattgaacagggaacgtttgcaggaatcctgattggt
ctggcccagttgaactgctctgagctgaagctgaagaggctctgctgcagacacggtctc
ctcggtgtggataaagtgatccagtacgccgtcactgagtggctgacggacatcaggaag
aatcagctgccgggcattctgggaggagtgggtcccatgcactcagtagtccagctgttc
cacggagtgagggatctgttctggttgcccatagagcagtacaggaaggacgggcgtatt
atccgaggtctccagaggggggcagcctccttcgggacgtccacagcttcagctgctctg
gagctcagcaacaggctggtgcaggccatacaggccacagcagagacggtgtacgacatc
ctgtctcccactccccccctgaaccgctttgccatcacagagggccgggccccctccagc
cggccccgcagagccgctcagcccgcagacctgcgagagggcgtggccaaggcctacgac
accgtcagagagggagtgattgacacggctcagaccttgtgcgatgtagcatcccgcggc
cacgaacagaagggtctgcccggcgctgtgggcggcgtcctgcggcagatcccgcccacc
gttgtccgacctttaatagtggcctctgaagcaacctccaatctgctcggtggcatgagg
aaccagatcaaaccagacgcccggaaggaggacttcctgaagtggcgcaccgacggccaa
gaatga
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integrated database retrieval system
