Trematomus bernacchii (emerald rockcod): 117487801
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Entry
117487801 CDS
T09643
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117487801
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117487801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117487801
03036 Chromosome and associated proteins [BR:
tben03036
]
117487801
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117487801
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117487801
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
117487801
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
117487801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF4172
Motif
Other DBs
NCBI-GeneID:
117487801
NCBI-ProteinID:
XP_033992361
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MSSAGTVESSRPPKIGSTVEVTGKGQRGTVAYIGATLFASGKWVGVILDEAKGKNDGTVQ
GKRYFTCEENHGIFVRQSQLQVVDDGSGATSPETPESGIARTLRQKDIPETPRSKQTPVN
IKKSSTRRSAKWSTPGRLTPATSLPSLLIRPSVRSNLLPLMASRESLSTSLSGDVSEAAH
PSHPAALGAPVMPQPSGSPAASAAAVPATPSKVEPVISKQEEESMRAQVKDLEEKLETLK
MKRTEDKAKLKELEKHKIQLEQLQEWKNKMQEQQADLQKQLKEAKKDAREAQESKDHYME
EMSDTADAIEMATLDKEMAEERSESLQVEVDTLKEKVEELSMDLEILRHEISEKGSDGAA
SSYHVKQLEEQNSRLKEALVRMRDLSTSEKQEHLKLQKQMEKKNTELETLRTHKEKLQED
VKQAEATVDELKEQVDAALGSEEMVETLTERNLDLEEKVREMRETVIDLEAINEMNDELQ
ENGRETEMELREHVDLSGAKVREAEKKVEAAQETVADYQQTINKYRDLTTSLQDANRELI
SQQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQSNRQVSLLTSFMPDS
FLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNLPQGQGLRGPPGDQRSFASG
LVYSLSLLQATLHKYEQALNTCSVEVFKRMGTLYSEMSFHERSLDYFIDLLHKDQLDETV
QVEPLTKAIKYYQQLYSVHLADHTEDCTVQLADHIKFTQSVLDCMGVEVARLRVFLTAGQ
EGSNFAVLLKDLDTSCSDIKQFCKKIRRRMPGTDVVGVPVALNFGPQVSELLTECRRQHT
RVVAVLQEVAAAGAQMVAQVAEQEGLNALKLEDIACKALEQVYGSHGLNGTECLRQSCSA
VITSMNKMATAMQEGEYDADKPQGQTLPVEARAATVRAEMTDAEGLGVKLEDRETVIKEV
KKSLKIKGEELSEASVRLSLLEKKLDTSTKDADERVEKIQTKLDENLALLKKKEKEFEET
MDALQADIDQLEAEKAELKQRITSQSKMTIEGLRAPAASGIANIVQGSAGGLPPAMAGSV
QVVDSPLLRQQVEAQRLGIKHLKNENNRLKAEKMRAQLASLPPLCPPKLPQASKDSSMPP
EGLNTGIYRRTDQLLATLLKLSSEVKVVDITGKTAVSAGAQMIEQTARLQNLSNALDKLK
GEVAEHVISHNPGAKASSDFATFPVSSFVKAKEEKQGGTVFVGRVAIPCTRGQEQVHRLV
LSQQQLHKVHRLLMA
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaggaacggtggagagtagtaggcctccaaagattggctctacagtggag
gtgacggggaagggtcagcgtggtaccgttgcttatatcggagccaccctctttgcctct
gggaaatgggtgggtgtcatcctggatgaggccaaaggcaagaatgatggcactgtgcag
gggaaacgctacttcacctgtgaggaaaaccacgggatatttgtcagacagtcccagctc
caggtggtggatgacggctctggtgccacctcaccagagactcctgaatcaggcattgca
aggacactgagacagaaagacattcccgagactcccagatccaagcagacacctgtgaac
attaagaagtcctctacccgacgctctgccaagtggagcactccaggccgcctaaccccc
gccacctccctcccctccctcttgatccgtccctccgtccgctccaacctgctgccgctc
atggcgtctcgtgagagcctgtccacctctctgtctggagatgtcagtgaggcggcccac
ccctcccatccggccgccctgggggctcctgtcatgcctcagcccagcgggtcacctgca
gcatcagcagctgcggttccagctactccaagcaaggtggaacctgtcatttccaagcag
gaggaggaatcaatgcgtgctcaggtcaaggacctggaggagaagctggaaaccctgaag
atgaagcggacggaggacaaagccaagctgaaggagctcgagaaacacaagatccagctg
gagcagcttcaggagtggaagaacaagatgcaggagcagcaggctgacctgcagaaacag
ctcaaagaagctaagaaggatgcccgggaggcacaggagtccaaggaccactacatggag
gagatgtcagacacggctgacgccatagagatggcaacactggacaaagagatggctgaa
gagcggtcagagtcgctgcaagtggaggtggacacgctgaaggaaaaggtggaggagctc
tccatggacctggagatccttagacatgagatttcagagaaagggtcagatggagctgcc
tcaagttaccatgtcaaacagctggaggagcagaatagcagactgaaggaggcattggtt
cggatgcgggacctgtctacttcagagaagcaggagcatttgaagctgcagaagcagatg
gagaagaagaacactgagctggaaaccctgaggactcacaaggagaagcttcaggaagat
gtgaagcaggcggaggccacagtcgacgaactgaaggagcaggtggatgctgctctgggg
tcagaggagatggtggagaccctgacggagaggaacctcgacctggaggagaaagtcaga
gagatgagagaaaccgtcattgatttggaggccatcaacgagatgaacgatgagctccag
gagaacggccgggagacggaaatggagctgagggagcatgtggatctgagcggagcgaag
gtcagagaggctgaaaaaaaggtggaggctgcccaggagactgtagctgattaccagcag
accatcaacaaataccgagatctgaccaccagcctacaggatgccaacagagagctgatc
agccagcagaatgcaaatgctgaacaagttcaacaaccgcctgctgaactgtttgacttc
aagattaagtttgcagagaccaaggcctatgctaaggccattgagatggagctgaggaaa
atggaggtggctcagtcgaacagacaggtgtccctcctcacctccttcatgccagactcc
ttcctccgtcatgggggagatcacgactgtattctggtccttctgctcatcccccggctc
atctgcaaggctgagctgatcagtaaacaggcccaggagaagtttgacctgaacgggaac
ttgccccagggccaggggctccgggggcctccaggagatcagcgcagctttgcctcagga
ctggtctactccctcagcctgctgcaggccactctgcataaatatgaacaggctctgaat
acctgcagcgtggaggtctttaagcgcatgggtacactctactctgaaatgagcttccat
gagcgctctctggactatttcatcgacctgctgcataaagatcagctggatgagaccgtt
caggtggaacctctcaccaaggccatcaagtactaccagcaactgtacagcgtccatctg
gcagatcacactgaagactgcacagtgcagctggctgaccacattaagtttacccagagt
gtcctggactgcatgggggtggaggtggctcgtctgcgggtgttcctgactgcaggtcag
gagggctccaacttcgctgtccttctgaaggacctggacacttcctgctctgatatcaaa
cagttctgcaagaagatccgccgtcgcatgcccgggacagatgttgttggagtacctgtt
gctctcaattttggaccacaggtgtcggagttgctgacggagtgcaggcgccagcacacc
cgtgtggtggctgtgctgcaggaggtggctgcagctggagctcagatggtggctcaggtg
gcagaacaggaggggctcaacgctctcaaactggaggatatcgcctgcaaggctctggag
caggtgtatggctctcatggcctgaacggcacagagtgtctgcgtcagtcctgcagcgcc
gtcatcacctccatgaacaagatggctacggccatgcaggagggagagtacgatgctgac
aaaccacagggccagacccttccagtggaagcaagagcagccactgtcagggctgagatg
actgacgctgaaggtctaggagtgaaactagaagacagagagacggtcatcaaggaagtc
aagaagtccctcaagatcaagggtgaggagctgagtgaggcaagtgtccgtctgagcctg
ctggagaagaagctggatacctccactaaagacgcagatgaacgggtggagaagattcag
accaaactggacgagaaccttgccctgctgaagaagaaagaaaaggagtttgaggaaacc
atggatgccctgcaggctgacatcgaccagctggaagcggagaaggcagagctgaagcaa
cgtattaccagccaatcgaagatgaccatcgaaggcctgagagccccagctgcctctgga
attgccaacattgttcagggatctgcaggaggtctgcctccagccatggcaggatcggtg
caggtggtggactctcctctgctccggcagcaggtggaagctcagagattgggaatcaag
cacctcaagaatgaaaacaacagactcaaggcggagaagatgagagcccagctggcctcc
ctgcctcccctctgccctcccaaactaccacaagcttccaaagatagctccatgccacca
gagggactgaacacaggcatctaccgcaggaccgaccaactgctggcaacccttctgaag
ctgagttcagaggtgaaggtggtggacatcaccgggaagacagcagtgagtgccggcgcc
cagatgatagagcagacggctcgactgcagaacctcagtaacgctctggacaaactcaag
ggagaagtagctgaacatgtcatctcccataaccctggagctaaggcttcctccgacttt
gccaccttccccgtctcctcctttgtgaaggccaaggaagagaagcaggggggaacagtg
tttgtagggcgtgttgccatcccatgcacccgcggacaggaacaagtgcaccgcctcgtc
ctgtcccagcagcagctgcacaaagtgcaccgcctcctcatggcctaa
DBGET
integrated database retrieval system
