Trematomus bernacchii (emerald rockcod): 117487875
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Entry
117487875 CDS
T09643
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117487875 (dennd4c)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117487875 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
117487875
NCBI-ProteinID:
XP_033992509
LinkDB
All DBs
Position
Unknown
AA seq
1916 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPISDLAVINRSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYKRGRGKSPLIDIGVLYEGKERLIHGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVTPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGATIEC
WAPNTRDPLPVFSTFVLTISSGEKVYGSAIQFYEPHPVDQLSEKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHHLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLVNSLSNLHHQLATVTVGQTPQDNSAV
DMTPIEADFTWHKKKTALEMEIQENFLRFMASILKGYRSYLKPITQAPSVKATSADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGAKVEGESSEDTRLLELDESQKSEHTVFVMPAEPPAHDGTEPSPRYTYKSFPRLQMELF
DCPMEIRPSISSSAAGASLSSSPALLAKRTKQEIKLAYKMAKHFYSNPPRWARCLFSHCY
SLWFICLPAAVRLSKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVMMQLCGIWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVVRGVAQFKKALH
PKSANKGPSATATSLGVSAVTDADRLSHGSADSSSEVNSEEHNRLAHGTEDTTDKHCSTG
RQSDQGYGSKDDMHQELVESLQTALLSTEQRNISKAQRNGGDIAGSVDSAIAVAEPPSPV
DVPLPVPSIVKLSTGSFDSGRETGTGKLFRRRSKNDNVSLPDDEASLPAGDAANQPQQQQ
RQKSFSERSCSFSAETRAGMLLEQGVDHLASQMGADARILAAALSACPSPPPNSVSKSLF
KDLEEEPEEDQVVMKLPEEKGQEEEKGDDEEMEGAELKLETRERKHTETNEEDPGLRGAT
LDRADVQVGADPLSLLVTEVEESASVTSQEPPRSVPAVVSRNLAEEIEMYMSLRSPLGPK
SSSMELQQAMGDSPDSPQPKQALERRSSLPVPPVKTPTGSPGDTPKRSPNTVTRSKTFAV
KTKTSGSAVGSPRSASLTALVKSAQGGSLGSVINSISGIKMDNLLTGPKIDVLKSSMKQA
ANVASKVWGVVASAYSYSDDEDEQAQGGGGFPSHLDEQMLAAHDVDDSPERGAIPGLVAN
GLNQSCTSLGSSSGSSDTGRGTHLTYQTPGRARGPDSEQGPSLHASSSSIYQNCALEVLM
SSCSQCRSCEALVYDEEIMAGWTADDSNLNTNCPFCSTAFLPLLHVEFHDLRTMTGFYMN
PSASGDSIHSGSAQPTASSAADIKAPDLLSFPEEEARETPDNQPGTLKSLVPEPVQSDPL
GLLEHQAAGKQRRCSGTSLTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSLQEVSDGMGT
KRPNPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLP
THLPGLILTSEHCNKGVQLPLTSLSQDSKQVYVQLLWDNINLHQDHGEPLYQLWRTLLEK
KGTLAPTDHQEIRTLLNTIVRSIQTNDVYGPINLLIREIKQRPEGFKRQRSIYREIMFLS
LVALGKENIDVEAFDREYRLAYDELSEEQLKSLHIIDQPPSPNVQWCLKCFGAPVI
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcctctggagcaggacctctccgagaccaagtccagcgggcccaaagccccc
atcagcgacctggccgtcatcaaccggtccgccggagagacggttcctgaaggcttcaca
tgcatcgacagcacctacagcggccagcccgccaacctcaaccacggcagcctgaagagc
cccgagctgttcctgtgctacaagaggggccgggggaagtccccgctcatcgacatcgga
gtgctgtatgagggtaaggagcgtctgatccatggctgcgaggtgatccaggccacgccg
tacggccgctgcgccaacgtcaacaacagctcggcaacatcgcagcgcatcttcatcacg
ctgcgccgagcgccgcccgtcacgccgcagaactccctcgcagtgaccgacatctgcgtc
atcgtcacgagcaaaggagagacgccgcctcacaccttctgcaaagtggacaagaacctc
aactgtggcatgtggggctccaatgtgttcctgtgttacaagaagtcagtgtctgcgtcc
aattccatcagttacaaagctggtctcatttttcgttacccagaagaggactatgagtcg
ttccctctgtcagaatctgtccctctgttctgtttgcccatgggtgcaacaatcgagtgc
tgggcgcccaacacacgagatcctctccccgtcttctccacatttgtcttaaccatctct
tccggggaaaaggtgtatgggtcagccatccagttttacgagcctcatcctgtggatcag
ctgagcgagaagcagaagatccagctgggcttgctcaccacggtggagaagaagatgatc
cctaaccgacccgtaaacaccaacaaatgcatctgcctgctctcccgctggcccttcttc
gagtccttccgcaagttcctgatgttcctctacaagctctccgtctccggcccgcaccat
ctgcccatcgaaaagcacatctcccactttatgcacaacgtgtcgtttccttcccctcaa
aggcccagaatattagtccagctgtcggcacatgacaccttgatcctctcccagcctgtg
tgtacacccctacccctcagcggggcagattacggcactctgctgatgaatctgggctcg
gagaactgtgccacgctgctgcacttcatcctgctggagagtaagatcctgctgcactcg
ctgcggcccgccgtgctcaccggggtggccgaggctgtggtggctatgatcttccccttc
cagtggcagtgtccctacatccctctgtgcccgctctctctcgctggagtcctcaacgct
ccgtgtccattcatagtgggcgtggactcccgctacttcgacctttacgaccccccgcca
gatgtcgtctgtgtagatctggacaccaacaccatctacctgtctgatgaaaagagacac
agcaactggaagaacctcccaaagaaaccctgcaagagtctggttaactccctgagcaac
ttgcaccaccagctggccacagtgacagtgggtcagacaccgcaggataactcggcggtg
gacatgactcccatcgaggcggacttcacctggcacaagaagaagacggcgctggagatg
gagatccaggagaacttcctgcgcttcatggcgtccatcttgaagggctaccgctcctac
ctcaaacccatcacacaggcgccttctgtaaaagccacgtctgcagactccctctacgac
ctgcaaggatttctcaaaagtagagaccgggcccaccagaagttctactcccagctcacc
aagacgcagatcttcatccgcttcatcgaggagtgcaccttcgtcagcgacaaggacacc
ggcctcgccttctttgacgactgcgtggagaagcttttcccctctgataaaatcaccgac
aagggcgctaaggtcgaaggagagtcctctgaggacaccagactgctggagctggacgag
tctcagaagagtgaacacactgtctttgtaatgccggcggagcctccagctcacgatgga
actgaaccctcccccagatacacatataaaagtttccccaggctgcagatggagctgttc
gactgtcctatggagatacggccctccatcagcagcagtgcggcgggggccagtctgtcc
agcagccccgccctgctggctaagaggaccaagcaggagatcaagctggcgtacaagatg
gcgaagcacttctactccaaccccccgcggtgggcgcgctgtctcttcagtcactgctac
agcctgtggttcatctgcctgcccgctgccgtcagactgtccaagtccaagagccgcgcc
atgcagcaggcctacaacgtcctcctgaagatgaggaccaccgaggtggaggtgctggat
gaggtgtgttacagagtgatgatgcagctctgcggtatttggggtcttcccgtcatggct
gtgcgagtcctggtggagatgaagaaagctggagtacatccgaacgccatcacttatgga
tactacaacaaggccgtcttagagagcccgtggccgagcagaaaccgaagcggcctcttc
atgtggaccaagcttcgtaatgttgttcgtggagtggcccagttcaagaaagccctccac
ccaaaatctgccaataagggacccagtgctacagctacatctctaggtgtgtcagcggtc
actgacgcggaccgtttgagtcatggaagtgccgacagctcgagtgaggtcaacagtgaa
gaacacaaccgcttagcccacggcacggaagacacaacagacaaacactgtagtacagga
aggcagtctgatcaaggctacggctccaaggatgatatgcaccaggagctggtagagtct
ttacaaacagccctcctttccactgaacagagaaacatctccaaagcacagcgcaatgga
ggtgacattgccggctcagtggacagtgctatcgcagtagcagagccccccagtcctgtg
gatgtgcccttgcctgtccccagtattgtgaagctttccacagggagctttgacagtggc
agggaaacaggcacagggaagctgttcaggagacgcagcaagaacgataatgtgtctctc
cctgacgacgaggcctcgctgcctgcaggagacgcagctaaccagcctcagcagcagcag
cgccagaaatccttcagcgagcgcagctgcagcttcagcgctgaaacgcgcgctggcatg
ctgctggagcaaggcgtggaccacttggctagtcagatgggcgccgacgctcgcatcctg
gctgcagcactgtctgcatgccccagtccgccccctaattctgtgtccaaatcacttttt
aaagacttggaggaagagcctgaagaagatcaagtggtgatgaagctgccagaggaaaag
gggcaggaagaggagaagggagatgatgaagagatggagggggcggagttaaaactggag
acacgggagaggaagcacacagagacaaacgaggaggaccccgggctgcgaggggccacc
ctggacagggccgacgtgcaggtgggcgccgacccgctttccctccttgtgacggaggtg
gaagagtcggcctccgtcaccagccaggagcccccccgctccgtgcccgccgtggtgtcc
cgcaacctggccgaggagatcgagatgtacatgagcctgaggagccccctgggccccaag
tcctccagcatggagctccagcaggcgatgggggactccccggactccccccagcccaag
caggctctggagcgcaggtccagcctccccgtgcctcccgtcaaaactcccaccggctcc
ccaggcgacacccccaaacgcagccccaacactgtgacccgctccaagactttcgcagtg
aagacgaagacctccggcagcgcggtgggtagcccccgatcagcctcactgacggcactc
gtcaagtccgcccaggggggctcgttgggctccgtcatcaactccatatcaggtatcaag
atggacaacctgctcaccggacctaaaatcgacgtgttgaagtccagcatgaaacaggcg
gcaaatgtggccagcaaagtgtggggggtcgtcgcttcagcttactcctactcagacgac
gaggatgaacaggctcagggcggcgggggcttcccctctcacctggatgaacagatgctg
gccgcacatgatgtggatgacagtcctgagagaggggccatcccggggctggtggccaac
ggcctcaaccagagctgcaccagcctgggcagcagcagcggcagcagcgacacgggccgc
gggacacacctgacatatcaaactccaggacgagctcggggtccagactctgagcagggc
ccctcgcttcacgcttcctcctccagcatctaccagaactgtgcactggaggtgctgatg
tccagctgctcacagtgccgctcctgtgaagcgctggtgtacgacgaggagatcatggcg
ggttggacggccgatgactccaacctgaacaccaactgtcccttctgcagcacggccttc
cttcccttactgcatgtggagtttcatgacttgcgcacaatgacagggttctacatgaat
cccagtgcttccggagacagcatccacagcggcagcgcccagcccacagccagcagcgcc
gccgatataaaggcaccagacctcctctctttccctgaagaggaagctcgggagactccg
gataatcagcctggaacacttaagagtctggttcctgagccggtgcagtcggacccctta
ggtctcctggagcaccaggcggcggggaagcagcgcagatgcagcgggacgtctctgacg
cgcagcaacagtgttgggggtccgctgcagagcctggactactcccagagacccggacac
ggcgtctccaccaccagcctgccctgcagcctgcaggaggtgtcggatggcatggggact
aaacgcccgaaccccaagcccgtgtccgtcccgtacctgagccccttggtgctgcgcaaa
gagctggagacgctgcttgagaacgagggagaccaggtgatctacacccacaagttcctc
agccagcaccccatcatcttctggaacctggtttggtatttccgtcgtttggacctgccc
actcacctccctggactcatcctgacctctgaacactgcaacaaaggagtgcagctgccc
ttgacatcactgtcccaggacagtaaacaggtttacgtccagctcctgtgggacaacatc
aacctgcaccaggaccacggggagcccctctaccagctctggaggaccctgttggagaag
aaggggacgctggcccccacagaccaccaggagattcgtaccctcctcaacacaattgtt
cgtagcattcagaccaacgacgtgtacgggccgatcaacctgctgatccgggagatcaaa
cagcgcccagagggattcaaacggcagaggagtatctatagagaaataatgttcctctca
ctggtggctttggggaaggagaacatcgacgtagaggccttcgacagagagtaccgcctg
gcgtacgatgaactgagcgaggagcagctcaagtctctgcacataatcgaccaaccgccc
agccccaacgtccagtggtgcctcaaatgcttcggagcccccgtcatctga
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integrated database retrieval system
