Trematomus bernacchii (emerald rockcod): 117487888
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Entry
117487888 CDS
T09643
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117487888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
TetR_C_11
Motif
Other DBs
NCBI-GeneID:
117487888
NCBI-ProteinID:
XP_033992528
LinkDB
All DBs
Position
Unknown
AA seq
2101 aa
AA seq
DB search
MIETMDTQRALQAVERLQARLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLRD
QESLPGSCETDLCDHVAAVKPNGGHVSYSDLSASTLINGKPSSEEFEHLVHSMAQGRYLA
HVDLQKPESGGLGFSVVGLKSENRGELGIFIQEIQAGSVADCDGKLREADQILAINGKIL
DQTVSHQQAIGLLQSTSERVQLTVARGPIPQLASPAVSRTPSAASTLSANSSAWQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLLGMGSEQV
AQVLRLCGNRVKLVVTRGPLEEGPSVAAVMPVVLPTVNEQGYEEEEEEEEEEEEEDEAFD
VSLTKNAQGLGITIAGYVGDKNSEPSGIFVKSITKDSAVDQDGRIHVGDQIIAVDSVDIQ
GFTNQQAVEVLRHTGHTVHLKLIRRGFKPEDLPPALAPSIGVLPPHTTIPTTTIVLEELE
LERRKAEEEAAAQVTADEKPPQTKSEVSDVGSTSDQLTDDTHGMKLTAFEEEELMKKWLE
ILGPSNEVVVAQVEKFSASSGLGISLEASSGHHYIRSVLPEGPVGRCGKLFSGDELLEVN
GLSLIGETHKEVVRILKELPLCVFMTCCRPAPHLQTDMHDVQPEPEILSTVSALKKQIDL
SIVRAAADSEVKAAAAAAAASVTEENVTEEVVASPLAMWELEIQNIELEKGEGGLGFSIL
DYQDPLDPAKTVIVIRSLVPGGVAEHDGRLLPGDRLMYVNSTELENGSLEDAVQALKGAQ
LGMVQIGVSKPLPGICGYSHSPHPYGEQEITPSSTIHSFDFNNILVEEGEEEGPAEGNVY
RAEPALIDTSEAEQLDHSYSTMDDDSFQASMMALHGSSCSADLDYLHASTPKLTARLDLL
EERPGFETPPGLEDDFPAFSPQKSASFSPPSLRGPTFNSILSPSDHFLAPHADTEEPEQC
LNSEAGTGALDEPAETPMCFEDIGDINMIKDEDAAVIAEDADEEALTSGSSFERTITVVK
GNSSLGMTVSAMKASLGMLIRSIIHGGSISRDGRLGVGDLILAINGEPTTHMTNAQARAM
LRRHSLIGPDLGSASAPEDDLCPFYVITYVPAEYLEEYKASLEQTTEEVSDEIHAVPAPD
PKDIPNLPEREDGEGEESASYNNWNQPRKVELFRAPGKSLGISIVGGRGMGSRLSNGEVM
RGIFIKHILEDSPAGQNGTLKTGDRIVEVDGVDLRDASHEEAVEAIRKGGNPVTFLVQSI
IHRPRSSGADSGEDRAAAVTKGNKDKEAYSHSRLFLRLSPTNPFTPTPFKSVKREAVKAP
PTSAVLPLPVMPHVGETDTDTLTESPGGPAEEEEEEEEEEQRVEQQEEEEEEDEFGYNWK
NVSQRYGGLPGVLHMMELEKGRTGLGLSLAGNRDRSRMSVFVVGIDPNGAAGRDGRMVVG
DELLEINGQVLYGHSHQNASSIIKSAPSRVKIIFVRNTEALQQMAVGPVREQEGGDMEGR
DPEDPPTEPETTAANGDTSKYIHHAIKLKQDGGLGITFVEGNTENGVEIQSISEVRGHTG
KEGCMRPGDKLLTVNGESVLGYTVEQVNSLLRTSKGPVKLTFSSLPSTSEDGDCSDGILP
GFPSMHSIAATTLSQPEAEAVMSLSRSSTPTTLTCDPTTCPIIPGCETTIDIFKGRTGLG
LSIVGGCDTLLGAIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLRVASHDEAINVLRQT
PQRVRLVVFRDEAQYKEEDLWDSFSVELHKQPGQGLGLSIVGRRNDTGVFVSDIVKGGLV
DTDGRLMQGDQILSVNGEDVRTSTQEAMAALLKCCVGPINMEVGRFKAGPFHSERRLSQS
SQMSENGSTRLVSQADNGPTDPDKPNMCLDTQEHQETRTVEFTKGPHDSLGVSIAGGVGS
PLGDIPIFIAMMNPVGLAAQTQQLKIGDRIVSICGSSAEGMTHAQAVSLLKSATGTIQLQ
VVAGGDTSVTGPPPEPPAAPITPSCIFQDDLGPPQYKSINLERGPDGLGFSIVGGYGSPH
GDLPIYVKTVFGKGAAAEDGRLKRGDQIMAVNGQTLEGVTHEEAVGILKRTKGTVTLTVL
S
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaatggacactcagcgtgccttgcaggcggtggagcgtctccaggcccgg
ctgaaggagcggggggaggtgcccaccgaggagaagctcagcctactcaagtctgtgctc
cagagccccctctttcaccagatcctcgccctgcagaagtccgtgcagcacctcagagac
caggagagtctcccagggtcgtgtgagactgacctctgcgatcatgtcgcagcagtcaag
cccaacggcggccatgtttcctactcagacctttcagcttctactctcatcaacggcaag
ccatcgtctgaggaatttgaacatcttgttcactccatggcgcaggggcgctacctggca
catgtggatctgcagaagccagagtcagggggtctgggcttcagcgtggtgggactgaag
agcgagaaccggggagagcttggcatcttcatccaggaaatacaagcaggaagtgtggct
gactgcgatgggaagctgagggaagcggatcagatcttagccatcaacgggaagatcctg
gaccagacagtgagccaccagcaggccatcggcctcctgcagagcacctcagagagggtc
cagctcaccgtggccagaggacccatcccccagctcgccagccccgcagtgtcacgcaca
ccctctgcagccagcaccctgtctgccaactccagcgcgtggcagcacgtggaaacgatc
gagctggtgaacgatggcactggcctcggcttcggtatcgtgggaggaaagaccaccgga
gttattgtgaagaccatccttcctggaggcatcgctgatcaggatggccgactgcgcagc
ggggaccacatcctgcggatcggggacactgacctgctggggatgggcagcgagcaggtg
gcccaggtcctccggctgtgtgggaaccgggtgaagctggtggtgacccgggggcccctg
gaggagggcccctctgtcgctgctgtcatgcctgtggtgctgcccaccgtcaatgaacag
ggctatgaggaggaggaggaggaggaggaagaggaggaagaggaggatgaagcgtttgat
gtgagcctaacgaagaacgcacagggtctgggcatcactatcgccggctatgttggagat
aaaaactcagagccctctggcatttttgtgaagagcataacaaaagatagcgctgtagat
caagatggccgcatccatgttggagaccagataatagctgtggacagcgtggacatccag
ggcttcaccaaccagcaggcggtagaggtgctgcgccacacaggccacacggtgcacctc
aagctgatccggaggggcttcaaacccgaagacctcccccccgctttggcccccagcatc
ggcgtgctgcccccccacaccaccatccccaccaccaccatagtgctggaggagctggag
ctggagaggaggaaggcagaggaagaggctgcggcacaagtcaccgcagatgaaaagcca
cctcagacaaagagcgaagtatctgatgtcggctcgacctcggatcagctgacagacgac
acacatgggatgaagctaacagcctttgaggaagaggaactgatgaagaagtggctcgag
attctgggtccaagtaatgaagttgtagtggctcaggtggagaagttcagtgcgagcagc
gggctgggcatcagtctggaggcgagcagcggacatcactacatccgctccgtccttcct
gagggacctgtgggtcgctgcgggaagctcttcagcggagatgaactgcttgaggtcaac
ggcttgtctctgattggtgaaacgcacaaggaagtggtgaggatcctgaaggagcttcct
ctctgcgtcttcatgacctgctgcagacccgccccccacctgcagactgacatgcacgat
gtccaaccagaaccagagattctgtctacagtgtctgcattaaagaaacaaatagacctg
agcattgtgcgggcggctgcagactcagaggtgaaggcagcagcagcagcagcagcagca
tcagtgacagaggaaaatgtgacggaggaggtcgtagcctctcctctggccatgtgggag
ctggagatccagaacatcgagctggagaaaggagaaggaggattgggattcagcatcctc
gactaccaggacccgctggacccggccaagacggtgatcgtgatccgctctctggttccc
ggcggcgtggcggagcatgacggccggctgctgccaggagaccgcctcatgtacgtgaac
agcacggagctggagaacggcagcctggaggacgcagtgcaggcgctgaagggggcccag
ctgggcatggtgcagataggagtgtccaaaccgctgcctggaatatgtggatattcccac
tctccacacccctatggtgagcaggaaattactccatcatccaccatccattcatttgac
ttcaacaatattttggttgaagaaggagaggaagaaggaccggctgagggcaacgtttac
cgagcagagccggcattgatcgacaccagcgaggcggagcagttagatcattcttactcc
acgatggacgacgactctttccaggcgtccatgatggctctgcacggcagcagctgcagc
gccgacctggactacctgcacgcatctacacccaagctgacggctcgtctcgacctgttg
gaggagcgtcccggattcgagactccacccggcctcgaagacgattttccagccttctcc
ccgcagaagtctgcctctttctctcctcccagtctcagaggcccgacttttaactccata
ctgagcccctctgaccacttcctggcaccacacgctgacacagaggaaccagagcagtgt
ttaaactctgaagcagggaccggagcattagacgaacctgcagagacacccatgtgtttt
gaagatattggagatataaatatgataaaggatgaagacgctgctgtgatagcggaggac
gctgatgaagaagcgctgacctcggggagcagctttgaaaggacgatcacagtcgtgaag
ggcaactccagcctggggatgactgtgagcgcgatgaaggccagtctggggatgctgatc
cgcagcatcatccacggcggctccatcagccgggacgggcgtctgggggtcggggatctg
atcctggccatcaacggagagcccaccactcacatgaccaacgctcaggcgcgagccatg
ttgcgacgacactcgctcattggaccagacctgggatctgctagtgcacctgaggacgac
ctgtgcccgttttatgtaatcacatatgtacctgcagagtatctggaggagtacaaggcc
agcctagagcagactacagaggaagtctccgatgaaatccatgcagtcccagctccagat
ccgaaagatattcctaacctccctgagcgggaagatggagagggagaggagagtgcctct
tacaacaattggaaccaacccaggaaagtggagctcttccgggcgccaggcaagtctctg
ggtatcagtattgtcgggggccgggggatgggcagtcggctgagcaacggagaggtgatg
aggggcatcttcattaaacacatcctggaggacagtcctgcgggacagaacgggaccctg
aagactggagacaggatcgtagaggtggatggagtagatctaagagatgccagtcacgag
gaggcagtggaggctatccgcaagggaggaaaccccgtcaccttcttggtacagagtatc
atccacaggccccggtcttcgggagcagactccggagaggacagagctgcagctgtgacg
aaaggcaacaaggacaaggaggcttacagtcacagtagacttttcctccgcctctcccca
actaaccctttcactcctaccccatttaagtctgtgaagcgtgaagcggtgaaggcacct
cccaccagcgccgtcctccccctgccggtgatgccccatgtgggggagactgacaccgac
acactgacggagagtcctggaggacctgcagaggaagaggaggaggaggaggaggaggag
cagagggtggagcagcaagaggaagaggaagaggaggatgagtttggatacaactggaag
aacgtctcccagcgttacggcggcctcccgggggtcctgcacatgatggagctggagaag
gggaggacgggcctgggtctcagcctggccgggaacagggaccgctcccgcatgagtgtg
ttcgtggtgggcatcgaccccaacggggcggcgggcagggatggacgcatggtggtgggg
gacgagctgctggagatcaacgggcaagtcctctacggacacagtcaccagaacgcctcc
tccatcatcaagagcgctccttccagagtcaaaatcatctttgtcaggaacacggaggcg
ctgcagcagatggctgtgggaccggtgagagagcaggaggggggagacatggaggggaga
gaccctgaggacccccccactgagccagaaactactgctgctaacggagacacttcaaaa
tatattcatcacgccataaagctgaagcaggacggaggactgggcatcaccttcgtggag
ggaaacacagagaatggagtggagattcagagtatatctgaagtgagaggacacacagga
aaggagggctgtatgagaccaggggacaaactcctaactgtgaacggggaatcagtgctc
ggctacactgtggaacaggtgaactctctcctgaggacatccaaaggtccagtgaagctc
accttctcgtctctcccgtccaccagtgaggatggggattgctccgatggcatcctccca
ggctttccaagcatgcatagcattgcagcaacgactctgagtcaaccagaggcagaggca
gtgatgagtttgagtcgctcctccacccccaccacgctgacctgtgaccccacgacgtgt
cccatcatccccggctgcgagacgaccatcgacatcttcaagggccgcaccggcctcggc
ctcagcatcgtggggggctgcgacaccctgctgggggccatcattatccatgaagtgtat
gaagaaggagctgcttctaaagatggcagactctgggcaggagaccaaatcctggaggtg
aacggcatcgacctgcgagtagcgagtcacgatgaggcgatcaacgtcctgcggcagacc
ccccagagggtccggctggtggtcttcagggacgaggcgcagtacaaggaggaggacctg
tgggactccttcagtgtggagctgcacaagcagccaggacagggcctgggcctgagcatt
gtggggaggaggaacgacaccggagtgtttgtgtctgacattgtgaagggggggctggtg
gacactgacggccggctgatgcagggcgatcagatcctgtccgtcaacggggaggatgtg
aggacgagcacgcaggaggccatggctgcactgctcaagtgctgcgtggggcccatcaac
atggaggtggggaggtttaaagccgggcccttccactctgaaagaagactctctcagagc
agtcagatgagtgagaatggcagcaccaggttggtctctcaggcagacaatggccctact
gaccccgacaaaccaaacatgtgtctagacactcaagagcatcaggagaccaggacagtg
gagttcactaaggggccccatgactctctgggggttagtatagcggggggcgtgggcagc
cctctgggggatatccccatcttcatcgccatgatgaaccctgtgggcctggctgctcag
actcagcagctcaaaattggggaccgcatcgtcagtatctgtgggagctcggctgaaggc
atgacccacgctcaggctgtcagtctgctgaagagcgccacaggcacaatacagctgcag
gtggtagcaggcggcgacacctctgtgaccggaccccctccggaacccccggctgcacct
attactcccagctgcatcttccaggacgacctcggcccccctcagtataaaagcatcaat
ctggagagaggacctgatggcctgggcttcagtatagtgggggggtacggcagcccccat
ggagacctgcccatctacgttaaaaccgtgtttggaaagggggcagcggcagaggacggc
cgactgaagcggggggatcagataatggcggttaacgggcagactctggagggcgtcact
catgaagaagccgtgggcatcctgaagaggaccaaaggaaccgtcacactcactgtcctc
tcataa
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