Trematomus bernacchii (emerald rockcod): 117487914
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Entry
117487914 CDS
T09643
Symbol
sec24d
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117487914 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117487914 (sec24d)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117487914 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
117487914
NCBI-ProteinID:
XP_033992572
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYQGGFGAGPAQPLYGHYGGPPQTFNGPPTGMMKAPVSSA
AGMPPPAAPSQYNPNVQQNGAHPQRYPPPAAPASYGQPLQSQYNNMAPAAPPPAQQLTNQ
MSTMNLGSYASGPMQSPPPPTNSVAQQPFQPAPPPAMGQPMMPPGPQSPHMSPIMSAPQS
PQANMPMAGPPMAGPPMAGPPMGGPPMSGMGRPFPGPLPPGPGGFQQPGPGPAGPTGYPQ
QAGQFGGHVAGPQPGMMGPQPGMMGPQPGMMGPQPGMMGPQPGMMGPQPGMMGPQPGMMG
PQPGMMGPQPGMMGPQPGMPGAFPGSAGGLAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQ
VYNTNIRGQVPPLVTTEFPIQDQGNASPRFIRCTTYSLPCTADLAKQCQVPLAAIIKPFA
SVPKNETPLYVVNHGETGPIRCNRCKAYMCPYMQFIDGGRRFQCGFCNCVNEVPAFYFQH
LDHMGRRVDFYERPELSLGSYEFAATLDYCKNNKVQNPPAFLFMIDVSYNNVKSGLVKLI
CDELKTLLDNLPCEDGSESSAIKVGFVTYNKVLHFYNVKSALAQPQMMVVSDTAEMFVPL
LDGFLVNYQESRAVIYNLLDQIPDMFADSNESETVFVPVIQAGVEAFKAAECSGKLFIFH
SSMPTAEAPGKLKNRDDKKLVNTDKEKTLFQPQKGVYEQLSKECVAQGCCVDLFLFPSQY
VDVATMADVPSHTGGSVYKYNNFQVETDGEHFLTDLRKDVQKSIGFDAIMRVRTSTGFRA
TEFFGAIHMNNTTDIEMAAVDCDKALTVEFKHDDTLSEETGAHMQCALLYTTINGQRRLR
IHNLSLNCSLQLSELYKSCETDSLINFFAKSACRAILNQPLKNVREILVNQTAHMLSCYR
KNCATPSAASQLILPDAMKVFPVYMNSLMKSAPLVGSTELSTDDRAHQRLSIMAMGVEDT
QLLLYPRLTPLHNLDVGSEALPAPVRCSEERLSESGMFLLENGQSMFLWLGQASPPDIVQ
SLFNVPSLAHLQGNMSALPELDNPLSAKVRSIISGLMEKRPNSMKLQIVRQKDKPEMLFR
QFLVEDKSLHGGASYMDFLCYVHREIRLLLT
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagggttatgttgctgcacccccgtactcccaggcccagcccgggatgggg
ggctaccagggtgggttcggagctggtcctgcacagcccctctatgggcactatgggggt
ccgcctcagacattcaacggtccaccaacaggtatgatgaaggcaccagtctcctctgca
gctgggatgcctccacctgcagcgcccagtcagtacaatccaaatgtccagcagaacggc
gcacatccacaaagataccctccaccagctgctcctgcttcttatggacagcctttacag
tcgcagtacaacaacatggcccccgcggccccccctccagctcagcagctcaccaatcag
atgagtaccatgaacctgggcagctatgcctcgggtcctatgcagagccccccccctcca
acaaactctgttgcccagcagcctttccaaccagcaccccctccagcaatgggccagccg
atgatgccaccaggaccacagtccccccacatgtcccccatcatgtctgctccacagtct
ccccaagcaaacatgccaatggcaggccccccaatggcaggccccccaatggccggacca
ccaatgggaggcccccccatgtcaggcatgggtcgaccctttcccggcccccttcctcca
ggccccggaggtttccagcagcctggtcctggacctgctggtccaactggatacccccag
caagcaggtcagtttgggggacacgtggcagggcctcagcctggtatgatggggcctcag
cctggtatgatggggcctcagcctggtatgatggggcctcagcctggtatgatggggcct
cagcctggtatgatggggcctcagcctggtatgatggggcctcagcctggcatgatgggg
cctcagcctggcatgatggggcctcagcctggtatgatggggcctcagcctggcatgcca
ggtgccttccctggatcagcaggcggactggcaggaccaccacagaagaaactggaccct
gactctatccccagcaccactcaagtcatcgaggatgaccaagcaaaacgagggggacag
gtgtacaacacgaacatcagaggacaggttcccccgctggtcaccactgagttccccata
caggaccaaggcaacgccagcccccggttcatccgctgcaccacctactccctgccctgc
accgcagacctggccaaacagtgccaagttccgctggccgccatcatcaaacctttcgcc
agtgtgcccaagaatgagactcctctgtatgttgtgaaccatggtgagaccggcccgatc
cgctgcaatcgatgcaaagcctacatgtgtccctacatgcagtttattgacggagggcgt
cgcttccagtgtggcttctgcaactgtgtcaatgaagtgccagccttctacttccaacat
ttggaccacatgggcaggagggtagacttctacgagaggccagagctgtccctgggctcc
tacgagtttgcagccaccctggactactgcaagaacaacaaggttcaaaatcctcctgcc
ttcctcttcatgatcgatgtgtcctataacaacgttaagagtggactagtcaaactgata
tgtgatgagctgaagactctgctggacaatctgccatgtgaggacggctcggagagctcc
gccattaaggtgggcttcgtcacctacaacaaggtgctccacttctacaacgtgaagagc
gctctggcccagccgcagatgatggtggtgtcggacacagcggagatgttcgtccccctg
ctcgacggattcctcgtcaactatcaggaatccagagccgttatctacaacctcctggat
cagatccctgatatgtttgcagactccaacgagagtgagacagtctttgttcccgtcatc
caggccggcgtggaggcatttaaggcagcagagtgcagcgggaagctcttcatcttccac
tcctccatgcccaccgccgaggctccgggcaaactgaagaacagggacgacaagaagctg
gtgaacaccgacaaagagaaaacgttgttccagcctcagaaaggagtgtatgagcagctg
tcgaaggagtgtgtggcgcagggctgctgtgtggacctcttcctcttccctagtcagtac
gtggacgtggccaccatggctgacgtgccctcacacaccggaggctccgtctacaagtac
aacaacttccaggtggagacggatggggagcatttcctgacagacctgaggaaagacgtg
cagaagagcatcgggtttgacgccatcatgcgtgttcgcaccagcacagggttccgagcc
acagagttcttcggagcgatccacatgaacaacaccacagacatcgagatggcggcggtg
gattgtgacaaggctctgaccgtagagttcaaacacgacgacacactcagcgaggagacc
ggagcacacatgcagtgtgcattgctgtacaccaccatcaacggacaacgacgtctccgc
atccacaacctcagtctgaactgcagcttgcaactgtcagagctgtacaagagctgcgag
accgactctctcatcaacttcttcgccaaatcagcctgccgtgccatactgaaccagccg
ctgaagaacgtgcgggagatcctggtgaaccagacggcccacatgctgtcctgctacagg
aagaactgcgccaccccctcagctgccagccagctgatcctgcctgacgccatgaaggtg
ttcccggtgtacatgaacagcctgatgaagagcgctcctctggttggcagcacggagctc
tccaccgacgaccgcgcccaccagaggctctccatcatggccatgggggtggaggacaca
cagctgctgctctacccacgcctcaccccactgcacaacctggacgtgggcagcgaggct
cttcccgctccggtgcgatgctccgaggagcgcctctcagaatccggcatgttcctgctg
gagaacggacaatccatgttcctgtggctgggccaggccagccctccggacatcgtgcag
agcctcttcaacgtgccctccctggcacacctgcagggaaacatgagtgctctgccagag
ctggacaacccgctgtccgcaaaggtccgctccatcatcagcggcctgatggagaagagg
ccgaactctatgaagctgcagatcgtgcggcagaaggacaaaccggagatgttgttccgt
cagttcctggtggaggataagagtctgcacggaggagcctcctacatggacttcctgtgc
tacgtccaccgagagatcaggctgctgctcacttaa
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