Trematomus bernacchii (emerald rockcod): 117488165
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Entry
117488165 CDS
T09643
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117488165
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
117488165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_NWD2_C
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
NPHP3_N
AAA_16
AAA_22
NACHT
Beta-prop_CAF1B_HIR1
AAA
AAA_28
NPHP3
Beta-prop_WDR19_1st
BTB_3
Motif
Other DBs
NCBI-GeneID:
117488165
NCBI-ProteinID:
XP_033992850
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MNPRWKSPPMWPSGVGSRQPCPRESALRKAAISGNINALPQHVPTGRSVRVFICANPDDT
EAERNALKEHVYPKLRDFCRENYGIEFQVVDLYWGTDPEEWDSPDLQRLRMKLLEECLKT
SAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGMDTHILEEWYCRDENSVPPAY
YLKPKAQMLKNYQNSVSASSNTKNDKAWRNVSEEIKKIFRTAVLQLQEKGTMKCPQAKKF
LCSALEDELDFALGKQTPAFLKKCVCYIRKIANFDRFAKIPEMTRYMDTVVSEDRVMRNQ
EAYERLLKIRDEFIPTVVAASNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQFYEDMVD
IIQATVQQNFGTEADPLYDEILQHLSLCKSYAELYDFKSESLDYVQEYIMPSKGSRTSPL
VVFGGPCTGKTLLLSEVAKQAYTWLQNELGPETDPVVIVRFVGSSQLSTDLRSLLQSICE
QIAINYRCLIHFLPTQIQEMKELLINLLGEATFHRPLVIVLDALEQLTDGDDVRKLWWLP
IHLPRTVRIVVSTLPNKHGILQKLRQLVHDERNYVELVQRDRKVCSQTLKQQLLGVKRKV
TSGQQIYVNEALAKCTLPMFVNLIYREVVHWRSHKDVDDRSLCSTVHESIEQLFYSVENK
LGQRFVFRALGYITMAKAGLTEVELEDILSLDNIVLGDVIVATYLKNPLRISYDLVARLR
EELYGYLVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGAWSGGRK
KIFTYDNNHFTSLNISVHKNPHNQQSHEKTSSDKYSYDRQTPEQPWVFQCNLLEPDIFFV
NHRKMTELVYHLTRSGRTDDLMFGVIMNFSWLYTMIKIGQFDKALTDIDLAYSYSQEKEL
KFLATTLRSVKLKVLKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYCSIVPLH
SSMDVTYSPERLPLCSSYMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLQRQIDTAK
SVVLGIRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEIKGSKQSGVAGGVAFINGFTL
STHHALAWLEASKDVNVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNTTSIFH
LGNGDKLATVTSEFSGGFVKSILVLDTLNQMVMVDNEGSLSVWNTKDITNTRLMEDYDCR
GDDSEVVGIELSEDQRSILICKARSIEVLDTKVWKMVEKFKAKRTERFVAAVLSKNGQSI
VASMENTSSIFVWRRDSGQCMASLIEVSGAIVKLIKSAHHNLLLSVASSGVLSVWDIDII
TAMSNIDKTGKKIQTLQLSGREDYVFTMDGSEAVHKWNFNTGFIETVFKHEGIVENCVLS
SSGDLMVTSDDKSSQYIWQTSTGENMFRINGQRISQLLITHNDQFVVSLCEQNASRVWRL
GTGHKVCNILVTLQNALVTTANTFLVGATKNKLLAVSLWSGSVSKKFVCDDGVTIVNFKL
IPDCPDCVVFITSTETVIIWSVADESVCRRVQLPINFLKNLEDFQISPNGKLGIVSKGDE
NINVLDLHSGKLRLVHAAGIIWRQKLSRDGRYLVYICFRNCDEDDEAGVVSNLIVMRLAD
GKSIGTCSLYKTPTFLSLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSNSRQIV
NNASQKVRPKCGNHSFKTVADCIWRESTEVFSRDSPINVSDSVEGESTTPTKKE
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacgctggaagtcgccccccatgtggccgtcgggagtggggagcaggcagccc
tgcccgcgggagtcggcgctgcgcaaggcggccatcagcggcaacatcaacgccctgccg
caacacgtccccaccggccgcagcgtccgggtcttcatctgtgccaaccccgacgacaca
gaggcagagaggaacgcattgaaagagcacgtctacccgaaactacgagacttctgcagg
gagaactatgggattgaattccaggtggtggacctgtactggggcacggacccagaggag
tgggacagtccagatctgcagagactccggatgaagctcctggaggaatgtctaaagacg
tcagcgggaccatgttttgttggtcttgtgggggaaaagtacggcagcatccgagtgccg
ggggaggtggagtcggcggagtttgagatgatcttggatgcagctgtggaggcggggatg
gacacacacatcttggaggagtggtactgcagggatgaaaactcagtgccacccgcatac
tacctcaaacccaaagcccaaatgcttaagaactaccagaactctgtgagtgcttcctca
aataccaagaatgacaaggcctggaggaatgtgtcggaggagatcaagaagatcttccga
acagcggtgctgcagctccaggagaaagggaccatgaagtgccctcaggccaaaaaattc
ctctgctctgccttggaggatgaattagacttcgcccttgggaagcaaacccctgccttt
ctcaagaaatgtgtctgctacattcgcaagattgccaactttgaccgcttcgctaaaatc
ccggagatgacccgctacatggacaccgtggtgagcgaggatcgcgtcatgcgcaaccag
gaagcctacgagcgccttctgaagatacgggacgagtttatcccaaccgtcgtcgccgcc
tccaacctccgtgtctactcttccgtcactcactgcgacatgaagctcggttactcccag
gaagtggagagccactacgtagaaggtctgtgtaaacagttctacgaggacatggtggat
atcattcaggccacggtgcagcagaacttcggcacggaggccgacccgctgtacgacgag
atcctgcagcacctgtcgctctgtaaaagctacgcagaactctacgatttcaagtcggaa
tcgttggattacgtacaagagtatatcatgccgtctaaggggagcagaacgagcccccta
gtggtgttcgggggaccttgcacgggaaagactttgctgctatctgaagttgccaaacag
gcgtacacatggctgcagaacgagttgggccctgaaaccgacccagtggttattgtccgt
tttgttggctcaagccagctctccacagacctacgcagcctcctccagagcatttgtgaa
cagattgcaataaactaccgctgcctgattcactttctgcctacacaaatccaggagatg
aaggagctcctgatcaaccttctaggggaagccacatttcacaggcccttggtcattgtc
ctggatgccctggagcagcttacagatggcgatgatgtccgcaagctgtggtggcttccc
atacatctgcctcggacagtccgcattgtcgtctcaacattgcccaataaacatggtatc
ctgcagaaacttcgccagctcgtccatgatgagaggaattatgtggaattagtccagagg
gatcgcaaggtctgcagtcaaacattaaaacagcagttgctaggggtgaaacgaaaggtc
acctcaggccaacagatctatgtcaatgaggcacttgccaagtgcacattgccaatgttt
gtcaacctcatctacagagaagtagttcattggaggtctcacaaagatgtggatgacagg
tccctatgctccacagtgcatgaaagcatagaacagctcttctactcagtggagaacaag
ttgggccaacgttttgtcttccgagcattaggatacatcaccatggccaaggctgggcta
actgaggtggagctggaggatattctgtcccttgataatatagttcttggcgatgtcatt
gtggcaacatacctcaaaaaccccttgaggatctcttatgatctggttgcaaggcttaga
gaggagctgtatggttatctggtggaacgtcaggtacgcaacgtcaccttgatggtttgg
gccaaccgacacctacatctcattgcccagaagctgtatcttagcaacgaggaagacgtc
catcaaatgcacagcctcctagctgagtacttcttgggggcatggtcaggaggcagaaag
aagatcttcacctacgacaacaaccatttcacttccctgaatatatctgttcacaaaaac
ccccacaatcagcagtctcatgagaaaacatcatctgacaagtactcgtatgacaggcag
actccagagcagccgtgggtgtttcagtgcaatctattggagcctgacattttctttgtc
aaccataggaagatgaccgagttggtgtaccacctaaccaggagtgggcgcactgatgac
ctcatgtttggtgtcatcatgaactttagctggctctacacaatgatcaagattggccag
tttgacaaagctttaacagacattgacctagcttacagctattcccaagaaaaagaactg
aagttcctcgccacaactctccgtagcgtcaaattaaaagtgctaaagaacccagcatca
ctgtctgcagaactgcagcaaaggctcctgccagttgtcacctccctcccaaagctcaga
cacctcctcttggagtgtgacaaagatggccccaagtactgctccatcgtgcctctacac
tcctctatggacgtcacatacagtccagagaggcttcctctgtgctctagctacatgcag
attgtggagatcttgccaaccctagcaccaaacatagtccttgtagccctcgaagatggg
tctgtcagcacctgggatgtagagagcagacaacttcaaagacagatagatacagccaaa
tctgttgtgctaggaatcaggctaaccactgatgaaaagtatctggtcgtggccacaacc
aaaaacacgctgctcatctatgataatcacaagtcctgccttttatctgaggttgaaatc
aaggggtccaagcaaagtggtgtcgctggtggggtggccttcatcaatggttttaccttg
tcaacccatcatgctttggcttggcttgaggctagtaaagatgtcaatgttattgaccta
ctttacggttggcctctctaccagttccattgctggtatgaggtgacttgtgtccagtgc
tctccagatggaatgtatgccttctgtggccagtacctcaacactacatccatctttcat
ctgggaaatggggacaagttggccactgtcacctctgagttttctgggggatttgttaag
tccattctagttctggacacccttaaccaaatggtgatggttgacaatgaaggcagtttg
tcagtatggaacaccaaagatatcaccaacacacgtctgatggaggattacgattgtaga
ggggatgacagtgaagtggtgggcattgagttatctgaagaccaacgctccattctcatt
tgcaaggcaagaagtattgaggttctggacacaaaagtatggaaaatggtagagaagttc
aaagccaaacgcactgaacgctttgtcgctgctgttctctccaagaatggacaaagcatt
gtggcctccatggagaacacctcctctatctttgtctggagaagggacagtggacagtgc
atggcaagccttattgaggtctcaggggctatcgtcaaactaatcaaatcagcccatcac
aacctgctcctttctgttgccagcagtggggtgttgtctgtttgggacattgatatcatc
accgccatgtcaaatattgacaaaacaggcaagaagatccagaccttgcagctgtccggc
agagaggattatgtgtttacaatggacggttctgaagctgtccacaagtggaacttcaac
accggctttattgagacagtctttaagcatgagggcatagtagagaactgtgtcctcagc
tcttctggggatctcatggtgacttcagatgacaagtccagtcagtacatctggcaaacc
agtactggagaaaacatgttccgcatcaatggacagagaatatcacagctgctaatcacc
cacaacgaccagtttgtggtgtccctctgcgagcagaatgcatccagagtctggaggctt
gggactggccacaaagtgtgcaacattttagtcaccctccagaatgcactggtcaccaca
gctaacactttccttgtgggagccaccaaaaataagctccttgctgtcagtctttggtcg
ggcagcgtatccaagaagtttgtctgtgatgatggcgttaccatcgtcaacttcaagctc
attcctgactgccctgactgtgtggtgttcatcacgtcgacagagaccgtcatcatctgg
agtgtggcagatgagtctgtttgcaggcgagttcagctgccaatcaatttccttaaaaat
ctagaggacttccagatctcgcccaatgggaaattagggattgtctccaaaggcgatgag
aatatcaatgtcctggatcttcacagcggcaagctgcggcttgtccatgctgctggtata
atttggcgtcagaaattatcaagagatggacgttatctagtgtatatctgtttccggaac
tgtgatgaagacgatgaagctggtgtcgtatctaatctgatcgtgatgcgccttgctgat
ggtaagagcatcggcacatgctccctgtacaagacacctaccttcctgtctctctcccag
cgagcacttaacatcatcattggcttcgaggacggcagcatcggcacatacacagtagtg
gatcgtgtggacgctgccctcaagataaagatagccacctcaaacagccgacagattgtc
aacaatgcctcgcaaaaggtgcggccaaaatgtggcaaccattcctttaagactgttgct
gattgcatttggagggaatcaaccgaggtgttctccagggacagccctatcaacgtgtcc
gactctgttgagggtgagtcgaccacgcctacaaaaaaagagtga
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integrated database retrieval system
