Trematomus bernacchii (emerald rockcod): 117488171
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Entry
117488171 CDS
T09643
Symbol
dtx4a
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117488171 (dtx4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117488171 (dtx4a)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117488171 (dtx4a)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117488171 (dtx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
PHD
Motif
Other DBs
NCBI-GeneID:
117488171
NCBI-ProteinID:
XP_033992855
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVCHHIEAVIRSDPRCGSVVLGQVDSRLSPYIIDLH
SMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDAGSWTAYDTEVGIAIQAARDRQQ
PWLDLAPLGFCYLIDFESMTQINGQTQRCRRIQRRSDLAYPLVAGPLPKSHHAWGPMAMP
SHGGLLGVDVSGVGMGIRMSNSGTGNGSAYPSGALPASAITSLGQPCACQQCMLVLSVKA
GAMSAHTLGRRPPQTKPPSPKMSYPVQGGSYSLTLPRPPSLSRSFSPHRTSIIGATGGYT
LGGMGGAGGVGTVGGGGYGSASFGYGGGFTHSLSLLGSATAALSLHSTRPPPPPLPPPPP
PPPPPSITLSSSATSTPHPSTSSSFSILSSAPTVPSLGPPLISTAASTCTPSPSARVLGP
VSSSGAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPA
LAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPIPGLGHCCRKTTKKQARKGKTP
EEVVKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGVSRAESVGRLAQCGHQYHLQC
LVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIP
PGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRRVLRLLLVAWDRRLIFSVGTSSTTGES
DTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLSRD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcatccgccgtagtggtatgggaatggctgaacgagcacggtcgctggcgg
ccctacagcccggctgtctgtcatcacatcgaggcagtcatccggagcgacccgcggtgt
ggtagtgttgtcctcggccaggtggactctcgcctctcgccctacatcatcgatttgcat
tccatgcaccagttccgacaagacacaggtacccttcgaccggtacgacgtagcttctac
gaccccacctcagcgcctggtcagggctggttgtgggagtgggagaacgacgctggcagt
tggacggcgtacgacacggaggtgggcatcgccatccaggccgcgcgcgaccgccagcag
ccctggctggacctcgcgccgctgggtttctgctacctcattgacttcgaaagcatgacc
caaatcaacgggcagacgcaacgctgccgacgcatccagcgacgctcagacttggcgtac
ccgctggttgccgggcccttacccaaatcccaccatgcctgggggcccatggccatgccc
agccatggaggactgcttggggtggatgtatccggagtgggcatggggatccgcatgagc
aacagtgggactggaaatggcagcgcgtaccccagtggggcgctccctgcctccgccatc
acctctttaggacagccctgcgcctgtcagcagtgcatgctggtgctgagtgtcaaagcg
ggcgccatgtctgctcacactcttgggcggagacctccacagaccaagccacctagtccc
aaaatgagctaccccgtccaaggagggtcgtactcactcactctccctcgacctccttcc
ctgtcgcggtccttctccccccacaggacgtccataattggtgcgacaggtggctacact
ctaggtggtatgggtggagcaggaggtgtagggactgttggcggcggtggttatggcagt
gccagcttcggttacggaggaggcttcacccactctctttccctcctcggctcagccacc
gccgccctctccctccactccacccgcccccctcctccacctctcccccctcctcctccg
cctcctcccccgccctccatcacactctcatcttctgccacctcaacccctcacccttcc
acctcgtcctccttctctattttgagctccgcccctacagtgccctccctaggtccacct
ctcatctccacggccgcctccacctgcacgccctcgccttcggcccgcgtcctgggcccg
gtgtcttcatctggtgccgctgcctgcgcggcccccctgcccccccggtccagcctcgcc
gggctgagccgacctgcactgcagcgaatcgccatggctcagtcacgtgcccttatcgcc
tctggagtgccaactgttcctgtaaagaacctgaacggatcaagcccggtacaccctgca
ctagcaggcattacaggcatccttatgagcgctgcaggacttcctgtctgcctgacccgc
cctcccaagctagtgcttcatcctccacccgtcagcaagagtgacatcaagcccatcccc
ggcctgggccactgctgccgcaagaccaccaagaagcaggctcgaaaaggaaagacccct
gaggaggtggtgaagaggtaccttcagaaagtccgcaatcccccagaggaagactgcacc
atctgcatggaggccctggccggaccctcgggctacaaaggccccggggtggggggcgtc
tcccgggccgagtcggtgggccgtctggctcagtgtggtcaccagtaccacctccaatgc
ctcgttgctatgtacaacaatggcaacaaggacggcagcttgcagtgtcccacctgtaag
accatctacggagtcaagaccggcaaccagcccccgggcaagatggagtaccacgtcatc
ccccactcgctacccggccacccggactgcaaaaccatccggataatttacaacatccct
cctggcatccagggccccgagcacccgaatccaggcaaacccttcactgcccgcgggttc
cccagacactgctacctccctgacagcgagaagggacgcagggtgttgaggcttctcctg
gtagcgtgggaccgccggctcattttctctgtgggtacatcgagtaccacgggcgagtca
gacacagtcatctggaacgaggtgcaccacaagacggagttcggctccaacctaacgggc
cacggctaccccgaccccggccacctggacaacgttctggaggagctcaaggcccagggc
atcacggaggaggagtgcctgtccagagactga
DBGET
integrated database retrieval system
