Trematomus bernacchii (emerald rockcod): 117488277
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Entry
117488277 CDS
T09643
Symbol
ppp2r5ca
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03015
mRNA surveillance pathway
tben04110
Cell cycle
tben04114
Oocyte meiosis
tben04261
Adrenergic signaling in cardiomyocytes
tben04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117488277 (ppp2r5ca)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117488277 (ppp2r5ca)
04114 Oocyte meiosis
117488277 (ppp2r5ca)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117488277 (ppp2r5ca)
09158 Development and regeneration
04382 Cornified envelope formation
117488277 (ppp2r5ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117488277 (ppp2r5ca)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117488277 (ppp2r5ca)
03036 Chromosome and associated proteins [BR:
tben03036
]
117488277 (ppp2r5ca)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117488277 (ppp2r5ca)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117488277 (ppp2r5ca)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117488277 (ppp2r5ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
117488277
NCBI-ProteinID:
XP_033993025
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MLTCNKSGDRMVVDAPNSNGPFQPVALMHFRDVAPAEQEKLFIQKLRQCCVLFDFLSDPL
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLDLFDSEDPRERD
FLKTTLHRIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
EVMFLNELEEILDVIEPSEFVKVQEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
DNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEK
AKSKEREEAWIKIENLAKSNPQFFMYVDSSDLNSPVAMETDVPLIEDVQRLKKTVEEGAT
QLQHDQRKERPMVRRKSELPQDIYTTKALESHRRADDMLTTHDGL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgcaataaatctggagacaggatggttgtggatgctcctaattccaatggg
ccttttcagccggtggctcttatgcacttcagagatgtggcccccgcagagcaggagaag
ctcttcatccagaagctacggcagtgctgcgttctctttgacttcctgtccgacccgctg
agcgacctgaaatggaaggaagtgaagcgggcggcgttgagcgagatggtggagtacatc
acccacaacaggaatgtcatcacagagcccatctacccggaggtggtgcacatgtttgcg
gtgaacatgttcagaacattgcctccatcgtccaaccccactggagcggagtttgatcca
gaggaagacgagccaacacttgaagctgcatggccacacctccagctcgtctatgagttt
ttccttaggtttctagaatcaccagactttcagcctaacatagcgaagaaatacatcgac
cagaaatttgttatgcagctcctagatctatttgacagtgaggatcccagagagagagac
ttcctcaaaactaccctccacaggatctatggaaagttcctgggactgagggcgtacatc
agaaaacacatcaataatattttctataggttcatctatgagacggagcaccataatggt
atagctgaactactggaaatacttggaagcataatcaatggatttgccttaccactaaaa
gaagagcacaagattttcctgttgaaggttttattgcctctgcacaaagtaaaatcactc
agtgtctaccatccacagctggcctactgcgtggtgcagtttttggaaaaggacagcact
ctaactgagccggtggtaatggcccttttaaagtactggccaaagactcacagtcccaag
gaggtgatgtttctcaacgagctggaggagatcctggacgtcatcgagccctctgagttt
gtcaaagtgcaggagcctctcttcagacagctggccaagtgtgtgtccagcccgcacttc
caggtggcagagagagctctttactactggaacaacgagtacatcatgagtctgatcagc
gacaacgcagcgaagatcctgcccattatgttcccggctctgtaccgcaactccaagacc
cactggaacaagaccatccacggcctcatctacaacgctctgaagctcttcatggagatg
aatcagaagctcttcgacgattgcacacagcagttcagggctgagaaaaacaaagagaag
gcaaaatctaaagaacgtgaggaggcttggattaagattgagaacctcgccaagtcaaat
ccacagttctttatgtatgttgattcctctgacctcaatagtcctgtagcaatggagacg
gatgtccctttgatagaagatgttcagaggttaaaaaagacagttgaggagggcgcgact
cagttgcagcatgaccagcggaaagagcggcctatggtgcgacgcaaatctgagttgcct
caggatatctacaccacaaaagccttggagtcccaccgcagagctgatgacatgttgacc
acccacgatggactctag
DBGET
integrated database retrieval system
