Trematomus bernacchii (emerald rockcod): 117488285
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Entry
117488285 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117488285
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Major cadherins
117488285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Gram_pos_anchor
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117488285
NCBI-ProteinID:
XP_033992996
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MITREYVFLFLVGTCFLLDYSSQTPLQAELQSRTKAGAMSARGGGGGKRMRALGDVPSLE
DGTRLGRRGRWKLQRNKRGWVWNQFFVLEEYMGSDPQYVGKLHSDMDHGDSAVKYTLSGE
GAGSIFNIDQITGDIHALVGLDREVKSYYTLKAQAVDMHTGLPLEPQSEFIIKVQDINDN
EPRFPDAPYSANVPEMSPTGTYVTQVTATDADDPTYGNSARIVYSILHGQPYFSVDPKTG
VIRTALANMDREIKGDYQVLLQAKDMGGLLGGLASTTTINVTLGDVNDNPPRFAKSIFHL
RVPESASVGSAVGGIRAYDPDAGANAEVDYTIVPGEEGNMFDIISSGQSQEGIVVLKKTL
DYETKKSYTFKVEASNAQLDPRFLHLGPFRDSATVKVSVLDVDEPPVFVQPSYSLEAYED
TPPGTIVGSVTAQDLDASSSAVRYSLEWQTESDSCFDIDTVEGTISTNDFLDRETADQHI
ITVVATKVSNPTLSTKAPVTVDVLDVNEFPPELAPPSQTFVCEDSRVGQVIQTLSALDRD
RPPVGQRFFFKAPKELRNRNFTVRDFGNNTAGIVTRRSGFQRRLQEVYVLPVVVEDSGYP
AQSSTSTLTIRVCSCGAGGSLLACSAEAVFLPAGLSTGALMAVLLCVALLIVIAALYMGQ
RRRKEKETLMTSKEDIRDNVIHYDDEGGGEADTHAFDMGTLRNTHSQRTSAHSSISKKEK
NGYGDGVLLHLSSRVDNVRSPDIHRQTASVIAAKNNKAPPTPPRGKVTEGDAIMIREFIT
QRLEESEQGYAAPPYDSLATYAYEGCGSVAGSLSSIEESWVIDDSGEFSSLGDWGQPFKA
LASIMDMKPSTLTEES
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaagggaatatgtcttcctgtttctggtgggaacctgtttcctgttggactac
agctcccagacccccctgcaagctgagctccaaagcaggactaaggctggagcgatgtca
gccaggggggggggcggaggtaagagaatgagggctttgggggacgtcccgtctctggaa
gacgggacgaggctggggagacgtgggaggtggaagctccagcggaacaagagaggatgg
gtgtggaaccagttcttcgtcctggaggagtacatgggctctgatccacagtatgttgga
aagctccactcagacatggaccatggagacagcgcagtgaagtacactctgtcaggagag
ggggcggggtctatcttcaacattgaccagatcacaggagatatccatgctctggtgggg
ctggacagggaggtaaagtcgtactacacactgaaggcccaggcggttgacatgcacaca
ggcctccctctggagcctcagtctgagttcatcatcaaggtgcaggacatcaacgacaac
gagccacggtttcccgacgctccctacagcgcaaacgttcccgagatgtctccaacagga
acctatgtgacccaggtgacagccacagatgcagatgaccccacgtacggtaacagcgcc
cgcatcgtgtacagcatccttcacggccagccgtacttctctgtggaccccaagacagga
gtgatcaggactgctctggccaacatggaccgggagataaaaggggactaccaggttctc
ctccaggccaaggacatgggaggtctgctgggggggctggcctccaccaccaccatcaac
gttacccttggagacgtcaacgacaacccgcctcgcttcgctaagagtattttccacctg
cgggtgccagagtctgcgtccgtgggctcggcagtcggagggattcgagcctacgacccg
gatgctggtgccaatgcagaggtggattataccattgttccaggagaagagggcaacatg
tttgacatcatctctagtggccaaagtcaagagggaattgtagtcttgaaaaagactctt
gactatgaaaccaagaagtcgtacaccttcaaggtggaggcgtccaacgctcagctggac
ccccgtttcctccacctggggcccttcagggactctgcgacagtgaaggtgagcgtcctg
gacgtggacgagccccctgtgttcgtccagccgtcctactctctggaggcgtacgaggac
acgcccccagggaccatcgtcggctcggtgacggcgcaggacctggacgccagcagcagc
gccgtcaggtattccttggagtggcagacagagtccgacagctgttttgacattgacact
gttgaaggaaccatttccaccaatgactttctggacagagagacagcagatcagcacatt
atcactgttgtggcaaccaaagtcagtaaccccacgctgtccactaaagccccggtgaca
gtggacgtactggacgtgaacgagttcccccccgagctggcccccccctcacagacattt
gtgtgtgaagactccagagtgggacaggtgatccagacgctgagcgccctggacagagac
cgcccccccgtgggacagaggttcttcttcaaggcccccaaagagctgcgcaacaggaac
ttcactgtgcgggactttggaaacaacacggctggcatcgtgactcgacgctcgggcttc
cagcggcggctgcaggaggtttatgttcttcctgtggtggtggaggacagcgggtaccct
gcccagagcagcacctccaccctcaccatcagagtgtgttcctgcggggcggggggctcg
ctgctcgcctgctccgccgaggccgtcttcctgcctgcgggtctcagcaccggagctctg
atggccgttctgttgtgtgtggctctgctgatcgtcattgcagcattatacatgggccag
agacgccgcaaagagaaagagactctgatgacatcaaaagaggacatccgcgataatgtt
attcactatgacgacgaaggtggcggcgaggctgacactcacgcattcgatatgggcact
ctgcgcaacacacactcccagcgcaccagcgctcacagcagcatctccaagaaggagaag
aacggctatggagacggcgtcctgctgcatctcagcagccgcgtcgacaacgtacggtca
cctgacatccaccgtcagacagccagtgtcatcgctgccaagaacaacaaggcgccgcca
acccctccccgcggcaaagtgactgaaggcgatgctataatgatcagggagttcatcaca
caacggttggaggagagtgagcagggttacgccgccccaccctatgattcgttggcgaca
tacgcctacgagggttgcggctcggtggctggctcgctcagctccatagaggagtcctgg
gttattgacgattcgggggaatttagctcccttggtgactggggacagccgtttaaagcc
ctggctagcatcatggacatgaaaccgtctactctgactgaggagagctga
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