Trematomus bernacchii (emerald rockcod): 117488415
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Entry
117488415 CDS
T09643
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00061
Fatty acid biosynthesis
tben00071
Fatty acid degradation
tben01100
Metabolic pathways
tben01212
Fatty acid metabolism
tben03320
PPAR signaling pathway
tben04146
Peroxisome
tben04216
Ferroptosis
tben04920
Adipocytokine signaling pathway
Module
tben_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117488415 (acsl3b)
00071 Fatty acid degradation
117488415 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117488415 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
117488415 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117488415 (acsl3b)
03320 PPAR signaling pathway
117488415 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tben01004
]
117488415 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117488415 (acsl3b)
Enzymes [BR:
tben01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117488415 (acsl3b)
Lipid biosynthesis proteins [BR:
tben01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117488415 (acsl3b)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of breast milk
117488415 (acsl3b)
Exosomal proteins of breast cancer cells
117488415 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF29
Motif
Other DBs
NCBI-GeneID:
117488415
NCBI-ProteinID:
XP_033993181
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFIPWYFLSGAGNNVERANRIKARSVSGLPLGPYR
ATNSQDKLVAWMHPNVDTLDKMFKYAASRFPQRDCLGTREVLSEEDEIQPNGKVFKKVIL
GNYNWLSYEEAYEAAKCFGSGLAALGLKPQCKIAIFCETRAEWMLVAQACFMYNFQLVTL
YSTLGPMAIAHGLNETEITHIITSKDLLQSRLKAIVCDVPRLQYIIVVDSKPTSWPNIPR
GITVYSMDAVKEIGAKPENIAVNRSQPESSDIAVIMYTSGSTGIPKGVMVSHGNIIAGIT
GMAERIPNLNESDTYIGYLPLAHVLELSAELVCISHGCSIGYSSPQTLADQSTKIKKGSK
GDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSKLQRTLFALAYNYKMEQISKGYSTPLC
DSLVFKRVRALLGGNTRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGTISEM
WDYSTGRVGAPLVCSEMTLKDWEEGGYYSTDKPNPRGEILIGGPNVTMGYYKNETKNRED
FYVDENGQRWFCTGDIGEIHTDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCSLIDN
ICAYANSDQSYVISFVVPNHKQLMALAEQVQVRGTWEEMCNNSQMEKEVLRIITEAALSA
KMERFEIPKKIRLSSEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggatatgaacccgctgctgctgcaagtcttccgttcggtggtgtgg
gtctactcggtcatcaccttcataccctggtacttcctctctggagctggcaacaacgtg
gagcgggcaaaccggatcaaggcgcgctcagttagtggactgccattagggccttacagg
gccaccaacagtcaagacaagctggtggcatggatgcaccccaatgttgacaccctggac
aaaatgtttaaatacgctgccagtcggtttccacagagagactgtctaggcaccagggag
gtgctcagtgaagaggatgagatccagccgaacggcaaggtcttcaaaaaggtaattctt
gggaactataactggctgtcgtacgaggaagcctacgaggcagcgaagtgttttggcagc
ggtctggcagcactcggcctgaagccgcagtgtaaaatcgccatcttctgcgagaccaga
gcagagtggatgttggtagcacaagcctgctttatgtacaatttccaacttgtgacactg
tattccactctcggacccatggccatcgcccacggcctgaacgagaccgagatcacgcac
atcatcacaagcaaagacctgcttcagagccgtctcaaggccatagtgtgtgatgtgccg
aggctgcagtatatcattgtagtggacagtaaacccacaagctggccaaacatccccaga
ggaatcacagtctacagtatggacgctgtgaaggagataggggccaagcctgaaaatatc
gcagtaaaccgcagtcagccagagtcctcagacatcgcggtcatcatgtacaccagcggc
tccacaggcatccccaagggtgtcatggtctcccatggcaacatcattgctggcattact
ggcatggccgagcgaatccctaacctcaatgaatcagacacctatattggctacctgccg
ttggcgcatgtgttagagctcagcgcagaactcgtgtgcatctctcacggctgtagcatc
ggctactcctccccccagactctagctgaccagtctaccaagataaagaagggcagtaaa
ggggacaccagtgtgctgaaacctactctcatggctgctgtaccagaaatcatggatcgc
atctacaagaatgtgatgactaaagtggaggagatgagcaaactgcagaggacactgttt
gcgctggcttataactacaagatggagcagatctccaagggttacagcacgccactctgc
gacagtctggtgttcaaacgggtgcgtgcgctcttgggagggaacacccgggtcctgctc
tcaggcggcgcccccctctctgctgccacacagcgcttcatgaacatctgcctgtgctgc
ccggtgggccagggctacggcctgacggagacctgtggagccggcaccatcagcgagatg
tgggactacagcacaggacgagttggtgctccattggtttgttcagagatgacactgaaa
gactgggaggagggtggatactacagcacagataagcccaacccacggggggagattttg
attggcggccccaacgtaacgatgggatactacaaaaatgaaactaagaaccgtgaggac
ttttatgtggatgagaatggccagagatggttctgtacaggagacattggagagattcac
actgacggatgcctgaagatcattgaccgtaagaaggacctggtgaagttacaggcaggc
gagtacgtctctcttggaaaggtggaggctgttttgaagaactgctcactcatagacaac
atctgtgcctatgccaacagtgaccagtcgtatgtgatcagcttcgtggtgcctaaccac
aagcagctaatggccctggcggagcaggtgcaggttagaggcacatgggaggagatgtgc
aacaattcccagatggagaaagaagttcttcgcatcattactgaagctgccctctcagcg
aaaatggagcggttcgagatccccaagaagatccgtctgagttctgagccctggacccca
gagactgggttggtcaccgacgcattcaaactgaaacgcaaggagctgaaatcacactac
caggaagacattgagagaatgtacggaggaaaataa
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