KEGG   Trematomus bernacchii (emerald rockcod): 117488418
Entry
117488418         CDS       T09643                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117488418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117488418
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     117488418
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 WDR54 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 117488418
NCBI-ProteinID: XP_033993185
LinkDB
Position
Unknown
AA seq 727 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTSKYVVLLSGSCVNFCPKYTV
VLSVVNLELSLMAYLRDILYLWTHYNPSPTASSLSGNKDSIYSLAMNQMGTVIVSGSTEK
VLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRV
HDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPP
AIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTNPLTPLCTQPEQVIKGGASIIQCHILN
DKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWFSVDLKTGMLT
ITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRINPMDEEENEVN
HVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWV
IDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE
SQTTSSSANDKPGDQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHFIWKSGGDLTL
HYRQKST
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcctatgtc
attagagatgaggtggagaagtacaaccggaatggggtgaatgcactccagctagacccc
gctctaaaccggctcttcactgctggaagagactctatcatccggatatggagtgtctac
cagcataagcaggatccatatattgcctcaatggagcatcacacagactgggttaatgac
atagttctctgttgcaatggcaaaacattgatatctgcctcatcagatacaacagtcaaa
gtatggaacgcacacaaaggcttttgtatgtccacgttacgaacacacaaggactatgtg
aaagctctggcctacgctaaggacaaggagctcgtggcatcagcaggcctcgaccggcag
atcttcctttgggatgtgaacacactaacggcactcactgcttccaacaacactgtcacc
agtaagtatgtggttttactcagtggcagttgtgtcaatttctgtccaaaatatactgtg
gttttgagtgttgtgaatttggagttgtctttaatggcttatctgagagatattctgtac
ctgtggactcactataatccttctccaacagcctcgtcactgagtgggaacaaggactct
atctacagtctggctatgaaccagatgggcacggtcattgtatccggatccactgaaaag
gttctgagagtgtgggatccccgaacatgtgcaaaactgatgaagcttaagggacacaca
gacaacgtgaagtcgttgctgctgaacagagacggcactcaatgtctgtcgggcagctca
gacgggaccatccgcctgtggtccctgggtcagcagaggtgcatcgccacctacagggtc
cacgatgagggggtgtgggccctgcaggtcaacgaggccttcacacacgtgtactctgga
ggccgagacaagaagatctactgcaccgacctgcgcaaccccgacatccgcgtgctcatc
tgtgaggagaaggccccggtgctcaaaatggaactggacagatctgctgaccctcctcct
gcaatctgggtctccaccaccaagtcatccgttaataaatggtctctaaagggaatgcac
aacttccgatcatcaggggagtacgacaacgactgcaccaaccctctgacgcctctgtgc
actcagccagaacaagttatcaagggaggagccagtatcatacagtgccacattctgaac
gataagagacacatactcaccaaagataccaacaacaatgtggctttctgggacgtcctg
aaggcttgcaagggtgaagacttggggaaagtggagtttgacgaagagattaaaaagcgc
ttcaagatggtctacgtgccaaactggttctctgtcgatctgaaaaccgggatgctcacc
atcacgctggatgaaagcgactgcttcgctgcctgggtctctgcaaaggacgccggcttt
tcaagctctgatggatccgacccaaagttgaacctgggtggactcctgctccaggctctg
ctggagttctggcccagaactcgcatcaaccccatggatgaggaggagaacgaggtgaac
cacgtgaacggggagcaggagaaccgggtccagaaaggaaatggatatttccaagtgcca
ccacacacgccagtcatctttggagaggcaggaggcagaactttatttaggttgctatgt
agagattcaggtggagagacggagtccatgctgctgaacgagaccgttccacagtgggtt
atagacataacggtagataaaaatatgcccaagttcaacaaaatcccattctacctccag
ccccattcttcctccggagcaaaaactctaaagaaggaccgcctctcggccagcgacatg
ctccaggtgaggaaggtgatggagcacgtttacgagaagatcatcaacctggacaacgag
tcgcagaccaccagctcctcggccaacgacaagccgggggatcaggagaaggaggaggac
atggccatgctcgccgaggagaagatcgaactaatgtgtcaagaccaggttctagatccc
aacatggacctgcgaacagttaaacattttatctggaagagcggaggggacttgacgctt
cactataggcagaagtccacgtga

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