Trematomus bernacchii (emerald rockcod): 117488449
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Entry
117488449 CDS
T09643
Symbol
serbp1b
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117488449 (serbp1b)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117488449 (serbp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
117488449
NCBI-ProteinID:
XP_033993231
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MPGHLQEGFGCVVTNRFDQLLDDESDPFEILKAAENKKKEAAAAGSNKTAAQAAKQPKKE
SQKDRKNPLLDKKDESQAPVPLKKEGIRRVGRRPDQQGQPGSQNQGGQGEGRPGDKRPDR
RPPRERRFEKPTEDKPEGGGEFSVDKPSGDRPPRGRGGGRGGRGGRGRGMGRGEGFDSRG
KRDFDRHSGNDKSNQKIEEKRSGSGSHNWGAVKDEPSEAEPTAAPETTPEGEESAPAGSE
NKENEVEEVKNDGPKEMTLDEWKAMQDKERTKVEFNIRKPNEGADSQWKKGYVLHKSKSE
DRPVGALIDAAETEVEPAPVFTKPQGPLDESSDHHFRKPANDITSQLEINFGDLGRPGRG
RGGARGGRGGRGGGGGGGGGGGGGGGGGGGGGAGGAGGGGGGGGGRPARGGGRPEKAGGV
SVPNVDDPEAFPALA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacacctgcaggaaggcttcggctgtgtcgtaaccaaccggttcgaccagtta
ttggacgatgagtccgacccgtttgagatcctaaaagcggcggaaaacaagaagaaggag
gcggccgccgctggctccaacaagaccgcagctcaagccgcgaagcagccgaagaaggag
tcacagaaggacaggaagaacccgctgctggacaagaaggacgagtcccaggctccggtc
ccactgaagaaagaaggtatcaggcgagtgggccgaagaccagaccagcagggccagcct
ggctcccagaaccagggggggcagggtgaagggcgacctggagacaagaggccggaccgg
agacctcctcgcgagcggcgctttgagaagccgactgaggacaagcctgagggaggtgga
gagttctccgtggacaagccttctggagacaggccccccagagggcgtggtggcggacgg
ggtgggcgcggtggaagaggacggggcatgggccggggagagggcttcgactcccgcggc
aaacgagacttcgacagacacagcggcaatgacaaatccaatcagaaaatcgaggagaag
cgcagcggcagcggctcgcacaactggggcgccgtgaaggatgaaccgagtgaggctgaa
ccgactgctgctccagagaccacccccgagggagaggagagcgcacctgctggctctgag
aacaaggagaacgaggtcgaagaggtgaagaacgacggcccaaaagagatgaccctggac
gagtggaaggccatgcaggacaaggagcgcaccaaggtggagttcaacatccggaagccc
aacgagggggctgacagccagtggaagaaaggatacgtgctgcacaagtccaagagtgaa
gacaggcctgtgggggctttgatcgacgccgcagagacagaagtggagcccgcccccgtg
ttcaccaagccgcagggccccctcgacgagtccagtgaccaccacttccgcaagcccgcc
aacgacatcacatcccagctggagatcaactttggagacctgggccgccccggccgcggg
cgtgggggggctcgtggaggcaggggaggccgtgggggaggaggaggtggaggtggagga
ggtggtggtggtggaggaggtggaggaggaggtggagctggtggagctggagggggtggc
ggcggcggcggcggcaggccggcacgcggaggaggacgtcctgaaaaggctggcggagtg
tccgtccccaacgtggacgaccctgaggccttccccgctctggcctga
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