Trematomus bernacchii (emerald rockcod): 117488576
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Entry
117488576 CDS
T09643
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
tben03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117488576 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
117488576 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117488576 (mnat1)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117488576 (mnat1)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117488576 (mnat1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117488576 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
TcdA1_RBD_2
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
117488576
NCBI-ProteinID:
XP_033993497
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKRDFDFPGLREYNDFLEQVEDIVFNLTNNIDVENTKL
RMDQYQKENRDLIQRNKVKLSREHEDLEELLLQEQQGNEQRRLDLLQEEQRQLQAKRKNK
QALLDELEKSQLPATILLAQHKVRAAKLETQIEQQKLAVKPTNLFSTGIHMRQTVSLQPV
PKIEEVLYQYKALHVETYGPLVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACHRAVQ
DAFSGMFVFKR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaggggtgtccgagatgcaaaacaaccaagtacaggaacccgtcgctgaag
ctgatggtgaatgtctgcggccacacgctatgcgagaactgcgtggagatgctgtttgtc
cgcggctcgggtaactgcgtccagtgcgacacgcccctgaggaagagcaacttccgcgtg
cagctcttcgaagacccggctgtagataaagaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagattttgacttccccggcttgagagaatataatgacttcctggag
caagtggaagacatagtgtttaacctgacaaacaacatagatgtggagaacactaagctg
cggatggaccagtaccagaaggagaacagagacctcatccagaggaataaagttaaactg
tcgcgagagcacgaggatctggaggagctgctgttacaggagcagcagggcaacgagcag
cggcgcctggacctgctgcaggaggagcagaggcagctgcaggccaagaggaagaacaag
caggctctgctggatgaactggagaagtctcaacttcctgccaccatcttgctcgctcaa
cacaaagtccgtgctgccaagctggagacgcagatcgagcagcagaaactggccgtcaaa
cctacaaacttattttcaactggaattcatatgcgacagacggtgtctcttcagcctgtt
cccaagatagaggaagttctgtaccagtacaaggcccttcatgttgaaacctacggaccc
ctagtgcctgaactggagcagctaggcagactcgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctttggcctgtcaccgagctgttcag
gacgctttcagtgggatgttcgtcttcaaacgctga
DBGET
integrated database retrieval system
