Trematomus bernacchii (emerald rockcod): 117488622
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Entry
117488622 CDS
T09643
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117488622
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Other domain-containing proteins
Patched domain-containing proteins
117488622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
DUF1699
NPC1_MLD
ACR_tran
Motif
Other DBs
NCBI-GeneID:
117488622
NCBI-ProteinID:
XP_033993521
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAILRTDCVERPLGICFEMTGHFIGSHPWWFLIAPLIFSTCLGSGFYLLQDRMSNDIEEQ
FTPFDGQAKLERKYIQETFTGNDSTFSRLRLSTDGNYATLIATNDRNILTVESLQDILDL
DFQVRSMVVQFDNQSFEYVDVCAEVMGSCTSNDILDIIKTNASNIDTVNLTFPWYNSNSR
SFPLYLSLGNVKLLNESTVVESAKAIQLYYYLREDNRTKTDLWLESFIKLVSNISSADIQ
VSYSTSMSMQWEFEKSPGSVIHLFSITYAIAITFSIISCWRLDNVRTKVWVAACGVLSTG
LAVLSGFGLLLLLDQPFVMTVASCPFMILGIGLDDMFIMISCWQRTSVLDSVPERLAYTY
KDAAVSITITTLTDALALFLGCSSPFGSVRSFCLYAGISICFCYLYSITFLGACMALNGQ
REAENKHWFTCANIPEDLPSRSSKAFGMCCVGGSYDRITEKEETEVVSHMFERFYGPFLT
HKSTKVCVFFLYAGYLAVSIYGCFNLNEGLDIRNLALDDSYLIKYYNDQGQHFAEYSCNV
MVAVKQPFAYWDADEQKHLCSCISHFESLNFVNGTLAWFLSFVQYTNGTNLNISSQESFL
THLPDFLELNAMFKHDINFTADTKIRASRFFVQTLNNASTKDMMIGLRKTAEECQVDLLV
YHPAFIYFDQYTVIMDNTIQTIMVAVMVMLVVSLILIPSPLCSLWVAFAICSVIVGVTGF
MALWGVNLDSISMINLVMCIGFSVDFSAHISYSFVSSPKSDVNEKAIDAMARLGYPILQG
ALSTILGVLVLSMSGSYIFRTFFKIVFLVITFGLLHGLVFIPVFLTLLGAFGKWF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggccatactacgcacagattgcgttgagaggcccctgggcatttgctttgagatgacg
ggtcattttatcggatctcatccttggtggttcttgattgcccctcttattttctcgaca
tgtcttgggagtggattttatcttctccaggacagaatgtcaaacgatatcgaagaacag
ttcacgcctttcgatggacaagccaagctggagaggaaatacatccaagaaacttttact
ggaaatgactccacgttttcgcgtttaaggctgagcacggacgggaattacgcaactctt
atagctacaaatgacaggaatattttgactgtggagtcactgcaggacatcctagactta
gattttcaagtaagaagtatggtggtccagtttgacaaccagtcatttgaatatgtggat
gtgtgcgctgaggtgatgggatcctgcacctccaatgacattttagacattattaaaacc
aatgccagcaatatagacacagtcaatttgacatttccatggtataactcaaattctagg
agttttcctttgtatttgagtctggggaatgtgaaattacttaatgagagcacagtagtt
gaaagtgctaaagccatacagctctattactatttacgtgaagacaacagaacaaagact
gacctttggttggaaagcttcattaaattagtctcaaacatatcatcagctgacattcag
gtttcttattccacctccatgtcgatgcagtgggaatttgaaaaatctccagggtctgtc
atccatttgttctccatcacctatgccatcgccatcacgttttccatcatatcatgttgg
aggttggataatgtgaggacgaaggtgtgggtggcagcctgcggggtgctctccacaggt
ctggcagtcctgagtggatttggactgctgctgctgctggatcaaccttttgtcatgaca
gttgcttcctgtcctttcatgatattaggtattggactggatgatatgttcatcatgatc
tcctgctggcagaggaccagtgttctggacagcgtccccgagcggctggcttacacttac
aaggatgctgcggtctccattaccatcaccaccctgaccgacgcgctggctctgtttctg
ggctgcagctcgccctttggttccgtccgctccttctgcctgtacgctgggatttctatt
tgcttctgctatctgtacagcatcaccttcctgggggcgtgtatggctttgaacggacaa
agggaagcagagaacaagcactggttcacctgcgccaacatccctgaagacttaccctcc
aggagttctaaagcctttggcatgtgttgtgttggggggagctatgatcgaatcactgaa
aaggaggaaacggaggtcgtgagtcacatgtttgagcggttctacggcccgtttttgact
cataaatcaacaaaagtttgtgtatttttcctttacgcaggctatctggctgttagcatc
tatggctgttttaacttaaatgaaggactcgacatcaggaatctggctttggatgattca
tacctcatcaagtactacaacgatcaagggcaacacttcgccgaatatagctgtaacgta
atggtagcagtgaagcaaccatttgcatactgggatgcagacgaacagaagcatctgtgt
tcatgcatttcacattttgagagtttgaactttgtcaatggcactttggcttggtttctc
tcctttgtacagtatactaatggaaccaatcttaatataagttctcaagagtctttccta
acacatctgccagatttcttagaactcaacgccatgttcaaacatgacatcaacttcaca
gcggataccaagattcgggcatctcgattttttgttcagacactcaacaatgcatccacg
aaggacatgatgattggacttaggaaaacagcagaggaatgccaagtagatctacttgtg
taccaccctgctttcatctactttgaccagtatactgtcattatggacaacaccattcaa
accatcatggtggctgtgatggtgatgctagtcgtctcgctcatcctaatacccagtcct
ctttgttccctttgggtggcttttgcaatttgttcagtcattgttggtgtgacggggttc
atggcactctggggtgtaaacctggactccatctccatgatcaacttggtcatgtgcatc
ggtttttcggtagacttctccgcacatatttcatattctttcgtctctagccctaagagt
gacgtcaatgagaaagcgatcgatgccatggcccgtttagggtatccaatactccaagga
gcactgtctaccattttaggagtgttggtgctgtccatgtccgggagttacatctttagg
acgttcttcaagattgtgtttcttgtgataacatttggcctgctccacggattagtgttt
attccagtatttctgactcttcttggggcctttgggaagtggttttaa
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