Trematomus bernacchii (emerald rockcod): 117488649
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Entry
117488649 CDS
T09643
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117488649
Membrane trafficking [BR:
tben04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117488649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
LRRNT
LRR_14
LRR_6
LRR_9
LRR_LRWD1
V-set
Motif
Other DBs
NCBI-GeneID:
117488649
NCBI-ProteinID:
XP_033993555
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MIGSPGPGGRALVPWPRVWGWLLASSLVAIITLTLPGSSQACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETQLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFASLPS
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRSLKHLEVGDNDLV
YISHKAFSGLLGLEDLIIERCNLTSISGQTLSYLRSLVTLRLRHLSIIALEDQNFRKLSN
LRGLDIDHWPYLEYISPFSFQGLDLRWLSITNTNITSVPSASFKNQVHLTHLNLSYNPIT
TLEPWAFKDLLRLKDLIMVSTGLVTVELHAFGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLNTFTDSALFDHFT
CQKPKIRNRKMQQVVAREGQPVSFLCRAEGEPAPAIIWISPQRRRITAKNSGRITVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRSHPLDAASAFFLNRSLYGGEFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPVTGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcccctggccctggtgggcgtgccttagtgccatggccgagggtgtgggga
tggctcctggcttcttctctggttgccataataaccttgacacttccaggaagtagccag
gcctgtccgccacggtgcgagtgttcggctcagctgaggtcggtgtcgtgtcagcggcgg
cggctcaccaacatcccagaaggcatccccacagagacacaactcctggacctcagcaag
aaccggctccgctgggtgcaagcaggcgacctggcaccgtacccacggctcgaggaagtg
gacctcagcgagaacctcatcgccacattagagcccaatgccttcgccagcctcccgagt
cttaaagtgctgaagttgagggggaaccagctgaagctagttcccatgggggctttcgcc
aaactgggcaatctgaccagcttggacctgagcgagaacaagatggtgattttattggac
tacaccttccaagatctgaggagtctgaaacatttggaggtgggagacaacgacctggtt
tatatctcccacaaggcattctcagggctgctgggtctggaagatctcataatagagcgc
tgcaacctgacatccatatctggccagacgctgtcgtacctgcgcagcctggttactctt
cgcctccgtcacctcagcatcattgccctggaggaccagaacttccgcaagctgtccaac
ctgcggggcctggacatcgatcactggccgtacctggagtacatttccccttttagtttc
cagggcctggacctccgctggctctccatcaccaataccaacatcacctccgtcccctcc
gcttccttcaagaaccaggtgcacctcacccacctcaacctgtcctacaatcccatcacc
acactggagccctgggccttcaaggacctgctgaggctgaaggacctcatcatggtaagc
acagggttggtgacagtggagctccatgcctttggaggccttcgacagatccgggtcctc
aacttctcctccaacgacctgcagactttggaagagggctccttccactctgtgaacagt
ctggagaccctcagagtggacgggaaccccctgatgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccggtgtgtgcggggccggtg
gaggtgcaaggggtcagcctgaacaccttcaccgattctgcactcttcgatcactttaca
tgccagaaacctaagattcgcaaccgtaagatgcagcaggtcgttgctcgtgaaggccaa
cctgtgagctttctgtgtcgagctgaaggagaacctgcacctgctattatctggatttcc
ccacagcgccggcggatcacagctaagaattcagggcgcattactgtcctcccgagtggc
accttagagatccgctacgcccagctcactgacagcggtacatacatctgcatcgccagt
aacgccggaggcaatgacacctactttgccacactcacagtgcgcagccacccgctagat
gctgcctcagccttctttctcaaccgctcactgtacggcggcgagttcttcaacgacaca
aatctgaacagcacgcgtgttttcctcaagttcacgttggacctgacgaccatcttggtc
tccacggccatgggctgcatcaccttcctgggggtggtgctcttctgtttcctgctgttg
ttcgtgtggagccggggacgcggccaacgcaagaacaacttcacagtggagtactccttc
cggaaatctgaacctgtcactggtagctcctcaggagggaccaggaagttcaacatgaaa
atgatatga
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