Trematomus bernacchii (emerald rockcod): 117488668
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Entry
117488668 CDS
T09643
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117488668
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117488668
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117488668
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117488668
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PA_decarbox
Motif
Other DBs
NCBI-GeneID:
117488668
NCBI-ProteinID:
XP_033993582
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKAQEALGSAGGGATALSLH
KEDGVCGREGGKESLSRSYSSGGSSSTLSDLDDIATLPDLFDLPLTPEEASDYCSMELIG
GGASAGNTSASSSSSSSPSLSNQNSPQQTMLDGADSNGIQILHPHTHALLDHLPNDCSIT
ELERITQSIVKSHLETCQHSAEDMKRFTWVQYAPEETRAFQNKSAEWMWQQCSHHITNAI
QYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNSSIFFNGKLAPAQFF
KALGCDDLVSAVFDLGKGLCRLQLSDEEMALFSAAVLLSPGRPWLTEGQKVQKLQEKVYL
ALQHSLHKSGAFEEKLDKMVSKLPIMKSICNLHADKLEFFRLLHPETAFSFPPLYREVFG
SDMTLPDSTNS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaggtcatcccctgtaagatatgtggggacaagtcctcaggaatc
cactatggcgtcatcacctgcgaaggctgcaagggttttttccgtcgcagccagcagaac
aatgccatgtactcttgttcccgccagaggaactgcctgatcgaccgaactaaccgtaac
cgctgccagcactgccgcctgcagaagtgtctggccttaggcatgagcagagatgctgtc
aagtttggtcgtatgtccaagaagcagcgtgacagtctctacgctgaggtgcagaaacac
cagaaggcccaggaggctttgggctctgcaggcggtggtgctacagctctgtccttacac
aaagaggacggtgtctgtggcagggaggggggcaaggagagtctgagccggtcctacagc
agcgggggctccagctccaccctcagcgacctggacgacatcgccacgctgccggacctg
ttcgacctgccgctgacccccgaggaggccagcgactactgcagcatggaactgatcggc
ggtggagccagtgcggggaacacctctgcctcatcttcctcttcctcctccccatccttg
tccaatcagaattccccgcagcagactatgctggacggggccgacagcaacgggatccag
attctgcatcctcacacacatgcactgctggaccatctgcctaatgactgctcaataaca
gaactcgagcgcatcactcagagtattgttaagtcccacttggagacgtgtcagcacagc
gctgaagacatgaagagattcacctgggtacaatacgcgcctgaggaaacacgtgctttc
caaaacaagtcagcggagtggatgtggcagcagtgttcccaccacatcaccaatgccatc
cagtatgtagtggagtttgccaaacgcattgctggcttcatggacttgtgccagaatgat
cagataatattactgaaagcaggctgtcttgaggtcctgctgatacgtatgtgccgagct
ttcaacgtaaacaacagctccattttcttcaacggaaagttagccccggctcagttcttc
aaagcacttggttgtgatgacctggtcagcgcagtgtttgacctgggaaaaggactctgt
cgtctacagctgtctgacgaagagatggctttgttcagtgctgccgtgctgctatctcct
ggtcgaccctggctaacagaaggccaaaaggttcagaaactccaggagaaggtctacctg
gctctgcagcacagtctacacaagagtggggcttttgaggagaaactggacaagatggtg
tccaagctgcccataatgaagtcaatctgtaacctccatgcggataaactggaatttttc
cgcttgctccacccggagaccgccttcagttttccaccactgtaccgggaagtgtttggc
agcgatatgactctgcctgactccaccaacagctag
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