Trematomus bernacchii (emerald rockcod): 117488712
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Entry
117488712 CDS
T09643
Symbol
med12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117488712 (med12)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117488712 (med12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
117488712
NCBI-ProteinID:
XP_033993656
LinkDB
All DBs
Position
Unknown
AA seq
2181 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYSVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQFPSQGCSSPLPATPADVETAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECFEKVRPGEDELLRLLLPLLLQYSGEFVQSAYLSRRLAYF
CTRRLNLLLSDGSLGPGTGGHPTHGMLTQQGNALPPTPTSQPAGGNQLQTAFTDFYICPQ
HRPLVFGLSCMLQSIVLCCPSALVWHYSLTDSRNKTGSPLDLLPIAPSSLPMPGGNTAFT
QQVRTKLREIEEQVKERGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFN
NSLDSLYNQIFGSGQSKEGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAERCGESEVVDEKGSVSSGSLSAATMPVFQDVLLQFLDTQAPTLTEPGNESERVEFS
NLVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEQDAGSN
VKMEDTGLSESMEIDANSSANFDEMFSPPMHCESKGSPSPEKPAPEQDSKVGIKDKGLDP
AFPQLYEQPRHIQYATHFPIPQEESASHECNQRLVVLYGVGKQRDEARHTIKKITKDILK
VLNRKSTAETGGEEGQKRKRSKPEAFPTAEDIFAKFQHLSHFDQHQVTSQVSRNVLEQIN
SFALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLVNELSLVEAELLLKSSSLVGS
YTTSLCLCIVAVLRRYHSCLILNPEQTAQCDGLRIVVKTGVNPADCSSAERCILAYLYDL
YTSCSHLKNKLGEIFSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHSM
VGKILNTSPANRYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGILKA
LCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLNA
ACSEQDSEPGARLTCRILLHLFKTPQRNPVPQDGVKSDKSSVGIRSSCDRHLLAASQNSI
VVGAVFAVLKAVFMLGDAELRGSGLSHPAGLDDISEGRNVSIETASLDVYAKYVLKTICQ
QEWVGERCLKSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSDEGDNPQRQRIKRIL
QNMDQWTMRQSSLELQLMIKQSTNNELYSLLENIAKATIEVFQKSAEMNSNPSGNGAAAQ
GGSGSNSTTSKMKPILSSSERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSS
RKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVTNWREDQYQD
DCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDMQSNNELFTT
VLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSESLEKVRQLLPL
PKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSTKQKISPWDVFEGLKHSAPLSWGWF
GTVRVDRKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEEEEPLTPVSQEPEKKMME
AVKPEKSVPAVPPDSNKKKSNKKKKTPSAKTEDYVNRTPGGVAYGTNMQPEMMQNHPYGR
LPYGQQSMNMYTQNQPLPPGGPGLEPPYRPARNPQMNKMMPNRPSYPGMIPGMQGGMPGM
MGMDKQYPMGYKPQPTMPQGQILRQQLQVRLNQSMIGQQIRQITPNQPYTSMQASQNISQ
GYTTYGSHMGMQQHPSQVGGIVPSSYGNQNFQGTHPGANPAVVDPLRQMQQRPSGYVHQQ
APGYANNMQNTQRFAHQPIQNPIMHGLSHMGGQGGHPGMRPNQMLAEQQQQQQQQQQQAA
QQQQYLRQQALRQQQAQQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQVQPQQVPPQQ
QVAQQQQQQQQQQQQQVAAGPPQGQQQNPGLGMQPLPPQQPMFPRQGMQQTQQQQQTAAL
VRQLQQQLSNTTPGQGANSYY
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctttcgggatcctaagttacgaacaccggccattgaagcggccccgactc
ggccctccggatgtttatccacaagatccaaagcagaaagaggatgagttgactgcacta
aatgtgaaacaaggattcaataaccagccagctgtctctggtgatgaacatggcagtgcc
aaaaatgtcaactttaacccttcaaagattagttcaaacttcagcagcatcatcgcagag
aagctgcggtacaacacatttccagacacagggaaacgtaaaccacaggtcaaccagaaa
gataatttctggctcgtcacagcaaggtcacaaagctccatcaataattggttcacggat
ttagcgggaactaaacctctgacacagctggctaaaaaggttccaatctttagcaaaaag
gaggaggtttttggatacttggccaagtactcggtccctgtcatgcgctcggcatggatg
atcaaaatgacctgtgcttatcacgcagccatcacagaaactaaagtcaagaagaggcat
gtgatcgatccctgtatagaatggactcagattatcaccaagtatctgtgggagcagctt
cagaaggtggccgagttttacagacagtttcccagtcaaggctgcagctcccccctcccc
gccacccctgctgacgtggagacagccatgaagcagtgggaatacaacgagaagctcgcc
atgttcatgtttcaggacggtatgttggacagacatgagttcctgacgtgggtgctggag
tgtttcgaaaaggtccgacctggtgaagatgagcttctcagacttctccttccgctttta
ctacagtactcaggggaatttgtacagtcggcttacttgtcacggaggctggcttacttc
tgtacacgccgcctcaacctgttgctaagcgacgggagcctaggacccggcacaggaggg
catccaacccatggcatgttgacgcagcaaggcaacgccctgcccccaacgcccacctcg
cagccggccggaggaaaccagcttcagacggccttcacagacttctacatctgcccgcag
caccggcccctggtgttcggcctcagctgcatgctgcagagcatagtgctgtgctgtccc
agtgctctggtctggcattactccctcacagacagcaggaacaaaactggttcccccctg
gacctcctgcccatcgctccgtccagtttacccatgcccgggggcaacactgccttcaca
cagcaggttcgaacaaagttgagagaaatcgaggagcaagtgaaggagcgaggccaggcc
gtggagttcaggtggtcgtttgacaagtgccaggagaccaccgcagggttcaccatcggg
agggttctccacaccctggaggttttagacaaccacagctttgagaagtctgactttaac
aactcgctggattccctgtacaaccaaatctttggctcgggtcagagtaaagaaggacat
gagatgtcgccagatgatgacgccgtggtgaccttgctgtgtgagtgggccgtgtgctgt
aagcgttcgggccgacacagagccatggtggtggccaagctgctggagaagagacaggct
gaaatagaagcagagaggtgtggtgagtcggaggtggtagatgagaaaggctccgtgtca
tccggctccctgtcagcggccacaatgccagtgtttcaggatgtcctgctgcagttcctc
gacactcaggcccccacactcacggagcctggaaatgaaagtgagcgtgtggagttctcc
aacctggtgctgctcttctgcgagctcatccgtcacgacgtcttttcccacaacatctac
atgtgcacgctcatttcccgcggcgacctggcttctgactcccacctgccgcgcccgcgc
tcccccagcgacgagccctccgatgagtcagagcgcaaggagcaggacgcaggcagcaat
gtcaagatggaggataccggtctgtcggagtcgatggaaatcgatgccaactccagtgct
aattttgacgagatgttctcccctccgatgcactgtgagtctaaggggagcccctccccc
gagaagcccgctccagagcaggacagcaaagtcggcattaaggacaaaggcttggacccg
gccttccctcaactgtatgaacaacctcgccacattcagtatgccactcacttccctatt
cctcaggaggagagtgccagccacgagtgcaaccagcggttagtggtcctgtacggcgtc
ggcaaacagagagatgaggcccgacacactatcaagaaaattaccaaagacatcttgaag
gtgctgaaccgcaaaagcacagcagaaacaggaggggaggaaggacaaaagcggaaaagg
agtaagcccgaggcctttcccactgctgaagatatcttcgccaaattccagcacctctcc
cactttgaccagcaccaggtcacctcccaggtgtcccgaaatgtgctggaacagatcaac
agctttgccttagggatgtcctatcacctgcctctcgtccagcacatccagttcatcttt
gacctcatggagtactccctcaacattagtggcctcatagactttgctattcagcttgtg
aatgagttgagtctggtggaagccgagctgctgctgaagtcctccagcctggtgggcagc
tacaccaccagcctgtgtctgtgtatcgtagctgtgctgaggaggtaccactcctgcctc
attctcaaccctgagcagaccgcacagtgtgatgggttgcgcatcgtggtgaaaacaggc
gtgaacccggctgactgttcctctgctgagcgctgtatcttggcgtacctgtacgacctc
tacacctcctgcagccacctcaagaacaagcttggcgagatcttcagtgagttctgctcc
aaagtgaagaactccatctactgcaacatcgacccttcagactccaacatgctttgggat
cctgtgttcatgatggaggccatcgccaacccctcggctcacaactttaaccactccatg
gtggggaagatcctcaacaccagcccggccaaccgctacagcttcgtgtgcaacgtgctg
atggatgtgtgtgtggaccacagagaccctgagagggtgaacgatattgggatcctgtgt
gcagagctgacggcgtactgccgctctctgagtgcagagtggctcgggatcctcaaggct
ctctgctgctcctccaacaatggcaactgtggcttcaatgacttgctgtgtaacgtagat
gttagcgatttgtccttccatgattccctggcaaccttcgtagccattctcattgcgaga
cagtgcctgctcctagaagacctggttcgctgtgtggccattccttctctcctcaatgca
gcctgcagtgagcaagactctgagccgggggcccgactcacctgcaggatcctgctgcac
ctcttcaagacgccgcagcgcaaccccgtcccccaagatggtgtgaagtcagataaatcc
tccgttggtatccggtcgtcgtgtgatcgccaccttctcgctgcttctcagaacagcata
gttgttggagcagtatttgctgtccttaaagcagtctttatgctgggtgatgctgagctg
cgaggctcagggctgtcgcacccggctggcctcgacgacatatctgaagggcgcaatgtc
tccatagaaacggccagcttggatgtttatgcaaaatatgttctgaagacgatctgccag
caggagtgggttggagagcgctgcctgaagtctctgtctgaggacagcagtgcgctccag
gacccggttctggtgaacattcaggcccaaaggctcctgcagctcatctgctatccacac
cgccagctggacagtgacgagggtgacaacccacagaggcagcgaatcaaacgcatccta
cagaatatggaccaatggacgatgagacagtcgtccctggagctgcagctgatgatcaaa
cagagcacaaacaacgagctctactcactcttggagaacatagccaaggccaccatagag
gtgtttcagaaatcagcagagatgaacagtaacccctcagggaacggagcagcggcacaa
ggtggctccggatccaacagcaccacgagcaagatgaagccaattttaagctcctctgag
cggtcaggtgtgtggctggtggctccgttgatagccaagctgcccacctcagtccagggt
cacgtactgaaggcagcaggagaggagctggagaaaggacagcacctcggctcttcatct
cgcaaggagagggacaggcagaaacagaaaagtatgtctctgctgagccagcagccattc
ttgtccttggtgctgacctgcttgaaggggcaggatgaacagagggaaggccttctcacc
tccctttatagccaagtgcagcagatagtgaccaactggagagaagaccagtaccaggac
gactgcaaggcaaagcagatgatgcacgaggctctgaaactgcgactcaatcttgtgggg
ggcatgttcgacacggtgcagcgcagcacccagcagaccactgagtgggcggtcctactt
cttgacatcatcagcagcggcacggtggacatgcagtccaataatgagctcttcaccaca
gtgttggacatgttgagtgttctgattaacggcacgctggctgctgacatgtccagcatc
tctcagggcagcatggaggagaacaagagagcctatatgaacctggtcaagaagctcagg
aaagagcttggggatcggcagtcggaaagtttggaaaaggttcgccagctcttgccactg
cccaagcaaacccgtgatgtcatcacctgtgaacctcagggctcactgatcgacaccaag
gggaacaagatcgctggatttgagaaggagggtctccaagtctcaacaaaacagaagatt
tctccgtgggacgtctttgagggtctcaaacactcagcccccctctcctggggatggttc
ggcacggtgcgcgtcgaccgcaaagtcaccaaatttgaggagcagcagcgtttcctgctc
taccacacccacctgaagcccaaacctcgcagctactacctggagccgctccccctgccc
cctgaagaggaggagcccctgacacccgtctcccaggaaccagagaagaagatgatggag
gcagtgaagccggagaagagtgtgcccgctgtgccccctgactctaataagaagaaatcc
aacaagaagaagaaaactccctctgctaaaacagaggactatgtcaaccgtacaccaggt
ggtgtggcttatgggactaatatgcaacctgagatgatgcagaaccatccatatggccgg
ctgccgtacggccagcagagcatgaacatgtacacacagaaccagcctctacctccagga
ggtcccggtttagagcctccatacagacctgcccgcaacccacagatgaacaaaatgatg
cccaaccggcccagctacccaggcatgattcccggtatgcaggggggcatgcctggcatg
atgggcatggacaagcaatacccgatgggttataagccccagcccaccatgcctcagggc
cagatactgcggcagcagctacaggtcagactgaatcaaagcatgatcgggcagcagatc
agacaaataacccctaaccaaccatatacttcgatgcaggcatctcaaaacatatctcag
ggctataccacatacggatcacatatggggatgcagcagcatccgtcccaggttggtggt
atagttccctcctcctatggaaaccagaacttccagggcactcatcctggagccaacccg
gctgtggtggatcctcttaggcaaatgcagcaaaggcccagtggttatgttcaccagcag
gctccaggctacgcaaacaatatgcagaacacacagaggtttgcccaccagccaatccag
aatcccatcatgcacggtctcagtcacatgggaggacagggtggccatccaggaatgagg
cccaatcagatgctggcagaacaacagcagcaacaacagcagcagcagcaacaggcagcg
caacagcagcagtacctcagacaacaagcactcagacagcagcaggcccaacaagctcaa
caacagcagcagcagcagcagcagcagcaacaacaacaacaacagcagcaacaacaacaa
cagcaacaacaacagcagcagccgcaacaggtccagccccagcaggttcctcctcaacag
caggttgctcagcagcagcagcagcaacaacaacaacaacaacagcaggtggcagcggga
ccacctcagggccagcagcagaacccgggcctgggcatgcagcctctgcccccccaacaa
cccatgttcccacgacagggaatgcagcagactcagcagcagcagcagactgccgctctg
gtccgacagctgcaacagcaactttcaaatacaacaccaggacagggcgccaattcatat
tactga
DBGET
integrated database retrieval system
