Trematomus bernacchii (emerald rockcod): 117488795
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Entry
117488795 CDS
T09643
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117488795
Enzymes [BR:
tben01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
117488795
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117488795
Prokaryotic type
117488795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117488795
NCBI-ProteinID:
XP_033993792
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSEKKRKSTSAAAVKEPSAKQQKLDPTKEKDWLQDSLKQQRTKNKQMKFNKERLRFISNT
ERIKQGSEGVLYWMSRDHRVQDNWALIHAQQLALKEKLPLHVCFCLFVPKSELSTLRHYS
FMLKGLKEVEKNCRSLDIQFHLLHGSAGDVLPGFVSDRELGAVVTDFSPLREPLQWLEDV
KKTLPKDIPLIQVDAHNIVPCWVASPKLEYAARTIRGKLTKLLPQFLTDFPLVEKHPYTT
ARTAKLIDWEKTLASLQVDRDVGEPEWAMPGTNGGVAMLESFIDERLKLFATQRNDPNIA
GLSQLSPWIRFGHLSAQRVALQVQSSGKCAGPSVATFIEELVVRRELTDNFCFYNEKYDS
VEGTHDWAQKSLKAHAKDKREYLYTREQLEKAKTHDKLWNASQYQMITEGKMHGFLRMYW
AKKILEWTSSPEEALSIALYLNDRYSLDGQDPNGFVGCMWSIGGIHDRAWGERKVFGKVR
YMNYKGCQRKFDVARFEKKYCPKNL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaaaaacgaaagtctacatctgctgctgctgttaaagaacccagtgctaag
cagcagaagctggatcccacgaaggagaaggactggctgcaggacagtctgaagcagcag
aggacaaagaacaagcagatgaaattcaacaaagaacgcctccgcttcatatctaacact
gagaggataaagcagggctcagagggtgttctgtactggatgtcacgagaccacagagta
caagataattgggctctgatccatgcccagcagcttgctctgaaggagaagcttcctctg
cacgtctgtttctgcctgtttgtcccaaaatcagagctgtccaccctgagacattacagc
ttcatgctgaaaggtctgaaagaagtcgaaaagaattgcagatccttagacatccagttc
cacctgctccatggttcagctggagacgttctccccggctttgtgtctgatcgagaactg
ggcgcagtggtaacagacttctcccccctcagagagccactgcagtggttggaggatgtt
aaaaagactcttccaaaagatattcccctcatacaggtagatgcccacaatattgtcccc
tgctgggtagcctcacctaaacttgagtacgccgccaggacaatcagaggaaaactcaca
aagcttctcccgcagttcctcacagactttcctctggtagaaaaacacccctacacaacg
gcaagaaccgccaaactcatagactgggaaaaaaccctagcctccctgcaggtagaccga
gatgtaggagagccggagtgggctatgccgggcaccaacggaggggtggccatgttggag
tccttcattgatgaacgcctcaaactattcgctactcaacgcaacgacccaaacattgca
ggccttagccagctgtccccctggatccgctttggtcacctttcagcccagcgtgtggcg
ctgcaggttcagagcagtgggaaatgtgcaggtccatctgtcgctaccttcatcgaggag
ttggttgtgcgaagggagctgacggacaacttctgcttctacaacgagaaatacgacagc
gtagagggtacgcatgactgggctcagaagagtttaaaggctcatgccaaagacaagagg
gagtatctctacacacgggagcagctggagaaagcaaagacacatgacaaactctggaat
gcctctcagtaccagatgatcactgaggggaagatgcatggtttcctgaggatgtactgg
gccaaaaagattctggagtggacttcttcaccagaggaggcgctctccatcgccctctac
ctaaacgaccgctacagtctggatggccaggaccccaatggctttgtcggttgtatgtgg
tctattggtggcatccacgaccgagcctggggagagagaaaggttttcggaaaggtccgc
tacatgaactacaaaggctgccagcggaagtttgacgtagctcggtttgagaaaaagtac
tgtcccaaaaacctttga
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