Trematomus bernacchii (emerald rockcod): 117488885
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Entry
117488885 CDS
T09643
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117488885 (gata6)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117488885 (gata6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
117488885
NCBI-ProteinID:
XP_033993928
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MDLGEHSWSMVKREVSSSPGSPAEQTYLPGDSRRDELRTPPIDLDTLGHRRPDGRSLHSY
VHFGHHNNTLTTVEDIPLFTDLDQGSKLVLSSGAHKASLLVDPSDMYQTLAIAAAQSQTG
YDSSSGYMHSNPNSPVYVPSSRVGSMIPSLSYLQASGPAQPSHAVSSHSVWSQSAPESPS
YSTGSPHTSSRFHYPPSPPMNNGNPRDTYGNTLNVSSRDQYGLSRPLSGTYASPYSPYVA
PQLTQLPSPWTGGPFDNTMLHTLQSRGAPLIRGPNGDILDDMGESRECVNCGSISTPLWR
RDCTGHFLCNACGLYSKMNGLSRPLIKPQKRTSTSRRIGLSCANCQTSTTTLWRRNAEGE
PVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKSKGSSGNNNSVSMTPTSTSSSN
SEDCSKTSSPPGQVSGVSSSVLSSSGEGPGSGSAVKYPGQDSLYTSVGLSQSSDVASVRG
EPWCPMALA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcgaacacagctggtccatggtcaagcgagaagtatccagcagcccaggg
tcgccggctgagcagacctacctgcccggggacagcaggagggacgagctgaggacacct
ccgatcgaccttgacacactggggcaccgccgccccgacggcagatcactacactcctac
gttcatttcggacaccataacaacaccctgaccactgtcgaggacatcccgctgtttacg
gatttagaccagggcagcaaactcgtcctctccagcggagcgcacaaggcgagcttgctg
gtggacccgagcgacatgtaccaaacactggccatcgccgcggcgcagagccagactgga
tatgattcctcctctggttatatgcactccaaccccaactccccggtgtatgtgcccagc
tcccgggtgggctccatgatacccagcctctcttacctgcaggccagcggccctgcgcag
cccagccatgccgtctccagccactcggtctggtcgcagtccgccccggagagcccttca
tacagcaccgggagcccgcacacctccagtcggttccactaccctccaagcccgcccatg
aataacgggaaccccagggacacctacggtaacacgctgaatgtgagcagcagggatcag
tacggcctctctcggcccctcagtgggacctacgcgagtccatactctccttatgttgca
ccgcagctgacccagctgccctcgccctggaccgggggaccttttgataacaccatgctg
cacaccctgcagagcagaggcgcgcccctgatccgaggacccaatggagatattctggac
gacatgggggagagcagagaatgcgtaaactgcggctccatctccacgccgctgtggagg
cgcgactgcacgggccactttctctgcaacgcctgcggcctttacagcaaaatgaatggg
ctgagccggccattaattaaaccacagaaacggacgtcaacttccagaagaatcggcctg
tcctgcgctaactgtcaaaccagcacgaccactttgtggcgcaggaacgcggagggagag
ccggtgtgtaacgcgtgtgggctctacacaaaattacacggggtacctcggcctctcgcc
atgaagaaagaggggatccaaacgagaaaaagaaaaccgaagaccttgaataaatccaag
ggatcctctggaaataacaactctgtctctatgactcccacatccacatcttcatctaat
tccgaagattgctcgaaaaccagctctcctcctggacaggtgtcaggggtcagttcgtct
gtgctgtccagctcaggggagggacccggctccggctcagcggtgaagtacccgggacag
gacagcctgtacaccagcgtggggctgtcccagtcctcagacgtagcttcagtgaggggg
gaaccctggtgccccatggccttagcttga
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