Trematomus bernacchii (emerald rockcod): 117488891
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Entry
117488891 CDS
T09643
Symbol
cacna1eb
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117488891 (cacna1eb)
04020 Calcium signaling pathway
117488891 (cacna1eb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117488891 (cacna1eb)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117488891 (cacna1eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
117488891
NCBI-ProteinID:
XP_033993934
LinkDB
All DBs
Position
Unknown
AA seq
2344 aa
AA seq
DB search
MLTNSDQSLSRSLTPNLHSPCSSGGNIRVQSSLSLPEPEAWRKPSSTPRHGLAQGARSSS
LQVPHAVTEYLGLPPRAASFDVSSDREDGSSDQGSGSLSPNCMQRRRGGLVEQKDIIMAH
QAHKIQSTPQARRKEWEMARFGDECAPSTVDSGDGDPELGGEGADAAAESLTASIRQAKA
QRARTMAMYNPVPHRQNCLTVNRSLFIFAEDNFIRRTARRFIEWPPFEYMILATITANCV
VLALEQHLPGDDKTPMAKRLEKTEPYFIGIFCFEAGIKLLALGFVFHKGSYLRNGWNVMD
FIVVLSGIMATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMIPLLQI
GLLLFFAILMFAIIGLEFYSGKLNQNCLPSVELLENQTVDSSELAFACGVRKCPEGYDCN
DTLIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGTTWNWMYFIPLIIIGS
FFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQAERELNGYRAWIDRAEEVMLAEEN
KSSGRSPLDVLKRASKKTGARRGAPGDEKYTDMSTASMSRSRMNFRSGRRGPAAYLRRKE
RMLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHNQPDWLTIFLYYAEFVFLGLFLAE
MFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVIWGFFRPGMSFGISVLRALRLLRIFKI
TKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTF
PASIMTVFQILTGEDWNEVMYDGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRPNFPEEPED
RPAPPEEQPLKGPNAFVSRRERRRKVHMSVWEQRANQLRKRRQVASREELFAGPTEDTEE
TPAVALPAPEATPGHLPESVGMPIPEPSMSVTIPIPETPASEPLVNLSEEKTGGGNHRAA
GGGRHRMARKFRPSQGGEDGARHRRHRHRDARPEAKSLDCTVSPHEVPLVKRSHSQEGVL
DEKEERDDREGAEREEGSVQEDGGTCIINPYAEVGEECQGETADPPQCEQLPERPWSEQV
DGEHTDQTLPVEPALEATEFSVRTIESESRQVSIKRAKSDPAESVAIEMSAQPLLELRPM
TVNSKELEAYNSEQTDKENDTEDDEEEDDDDEDEEEMEEPPTPPKPVAPDSMFIFKASNP
IRRICHYMVSLRYFEMTILLVIVASSIALAAEDPVCTNSDRNKVLRYFDYVFTGVFTFEM
IIKMIDQGLILHDGSYFRDMWNILDFIVVVGALIAFALTNVMGNNKGRDIKTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKGKFFYCNDS
SMNSEKECQGYYIDYSRDKKEMKRREWKRHEFHYDNVCWALLTLFTVSTGEGWPQILQHS
TDVTEDSMGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMIQECSLEK
NERACIDFAISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLVMIALNTVVLMMKHHS
APTAYDMVLKHLNTAFTVLFSLECMLKIMAFGLVNYFRDTWNIFDFITVLGSISEIIVDL
QSLNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAII
GMQVFGNIKLNDESHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLSGRECEPDSSI
PPLMTSPDHVGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHL
DEFVRIWGEYDRLACGRIHYTAMYETLIHMSPPLGLGKKCPAKIAYKRLVLMNMPVDEDM
SVHFTSTLMSLIRTALDIKIARGGEDRIALDSELQKEVSIIWPYLPQKNLDLLVPINKDT
DMTVGKIYASMMIMDYFKLNKAKKLRQQLEAQKSSLIFKRLDASTLPEDILSNTQTLPTM
AHSAGSALTRGGLLALSPISPEELFLQPIGSDTDVNQDLTEVAGGSMKRSVSTVADQRVN
GLWEEEQSPARLYRPRHKSYKAAVSRSEHWHQGDRERGRSKERCHLLSDASRGNSEERRL
QASRSSSGERAHPKDKQGNSSDSPVPSTSESSTPTGRRPAAKSSRPHISYSPLHPSVGKD
GDEQRSPVAKRRGKAKRGTQERVLDDRRGEEEQDPSPLRRYPSEPFLASQEGEHSPDPSG
PMETLTFEAAMACSLGRSNTVSSSRPRLRTGWQVPNGHFRKRLAQTTSSAGCDPLSDTEE
DDRC
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaactcagaccagtccctctcccgctccctcacacccaacctccactctcca
tgcagctctggaggaaatatacgcgtccagtcctccctgtcccttcccgagcctgaggcc
tggaggaagcccagctccaccccccgtcacggcctggcccagggagcgcggtccagctcc
ctgcaggttccccacgccgtcacagagtacctgggcctgcctcctcgagccgccagcttc
gatgtgtcttctgatcgggaggacggctcgtccgatcagggttcagggtctctgagcccc
aactgcatgcagaggcgtcgtgggggactcgtggagcagaaagacatcatcatggctcac
caggctcacaaaatccagagcacgccgcaggcccgcaggaaggagtgggaaatggctcga
tttggagacgagtgcgctcctagcacggtggactccggggatggagacccggagctcggc
ggggaaggagcggacgcggctgccgagagtctcaccgcctccatcaggcaagccaaggcg
cagcgggcccggaccatggctatgtacaaccccgtgccccaccggcagaactgcctcacc
gtcaacaggtcgctcttcatattcgcagaggacaacttcatcaggagaaccgccaggcga
ttcattgaatggccaccatttgagtacatgatcctggccaccatcaccgctaactgtgtt
gtgctggccctggagcagcacctccctggagacgataagacccccatggcaaagagactg
gagaagacagagccgtacttcatcgggatcttctgtttcgaggcggggatcaagctgctg
gcccttggttttgttttccataaaggatcgtacctgaggaacggctggaacgtcatggac
ttcatagtcgtgctcagcgggatcatggccactgctggagcccacatgaacatccccgtc
gaccttcggaccctgagggcggtgcgagtgctgagacctcttaaactcgtctcggggata
cccagcctgcagattgttctgaagtccatcatgaaggccatgatcccgctgctacagatc
ggcctgctcttgttcttcgccatcctcatgttcgccatcattggtctggagttttacagc
gggaagcttaaccaaaactgcctgccatctgtcgaactccttgaaaatcagacggttgac
tcgtcagagttggcgttcgcctgcggagtgaggaagtgtccggagggctacgactgcaac
gacaccttgatcggacccaacgacggcatcacgcagttcgacaacatcctgttcgctgtg
ctcaccgtcttccagtgtatcaccatggagggatggacggccgttctctataataccaac
gatgctttgggtaccacatggaactggatgtacttcatccctctcatcatcattggctcg
ttcttcgtgctgaacctggttttgggagtcctgtccggagagtttgccaaggagagggag
agggtggagaacaggcgggccttcatgaagcttcgccgccagcagcaggcggaaagagaa
ctgaacggctacagagcctggatagacagggcagaggaggttatgctggcggaggagaat
aaaagttctgggagatcgccgttagatgtgctaaagagagcgagtaagaagactggtgca
cggagaggagcgccaggggacgagaagtatacagacatgtctactgccagcatgtctcga
tccaggatgaacttccgcagcggccggcgaggcccagcagcctacctgcggcgcaaagag
cgcatgttacgcatctccatccgccgcatggtgaagacggacactttctacctgatggtg
ctcagtcttgtggctctcaacaccatctgtgtggccatcgtccaccacaaccagcccgac
tggctgaccatcttcctctactatgcagagtttgtttttctggggctgtttttggctgag
atgtttttaaaaatgtatggtctgggtttccggctctacttccattcatctttcaactgc
tttgactgtggggtcattgttggcagcatctttgaggtcatttggggtttcttcaggccc
ggcatgtcatttgggatcagcgtactgagggcgctgagactcctgagaatattcaaaata
accaaatactgggcgtctctcaggaacctggtcgtgtcccttatgagctccatgaagtcc
atcatcagcctgctgtttctcctctttctgttcatcgtggtgtttgctctgctggggatg
cagctttttggaggaaggttcatctttgaagattacactcccaccaactttgacacgttt
ccagcttccatcatgacagtgtttcagattctgactggtgaggactggaacgaggtgatg
tatgacgggattcgctcgcagggtggagtgcagtacggcatgtggtcatcaatctacttc
atagtgctcaccctgtttggaaactacacactactgaatgtcttcttggccatcgctgtg
gataatctggccaacgcacaggaactgacaaaggatgaagaggaggaggaggagttcttc
aaccagagatatgccagaggcagagacggcctgatatctgatgggaggagaagaccctac
ctatacaggaaacgagccatccaccgaggcagacctaacttcccagaggagcccgaggac
aggccggcgcccccagaagaacagcccctcaagggccccaatgccttcgtcagccgccgc
gagaggaggaggaaagtccacatgtcggtgtgggagcagagagccaatcagctgcggaaa
cgtcgccaggtggccagcagagaggagctttttgcaggccctactgaggacacagaggag
actcccgccgtcgccctccccgcccccgaggccaccccgggtcacctgcccgagtctgtg
gggatgcccatcccagagccctcgatgtccgtcaccatccccatccccgagaccccggcg
tcagagcctctggttaacctgagcgaggagaaaacaggaggaggtaaccaccgggcggca
ggcgggggccggcacaggatggcccggaagttcagacccagtcaggggggggaggacggg
gcccggcacaggaggcaccgtcaccgcgacgctcgccctgaagccaagagtctggactgc
accgtatcgcctcatgaggtgccgctggtcaaacggtcccacagccaggagggggtcctg
gacgagaaggaggagagggacgacagagagggggcagagagagaggaagggtccgtccaa
gaggatgggggaacatgcatcatcaacccatacgcagaagttggagaagagtgtcaagga
gaaactgctgaccctccccagtgtgagcagctgccggagcgtccctggtcagagcaggtt
gacggagagcacacagaccaaaccctcccagtggagcccgccctagaggccacagagttc
agtgtgaggaccatcgagtctgagagccgccaggtctccatcaagcgtgccaaatccgac
ccggcggaaagtgtggccatcgaaatgtctgcacaaccgctgctggagctcaggcccatg
acagtgaacagcaaagagttggaggcgtacaattctgaacagacggacaaagagaacgat
accgaggatgatgaggaagaggacgacgacgacgaggatgaggaggagatggaggaacct
ccgactcctcccaaacctgtagctccagacagcatgttcatcttcaaggcctccaaccca
atccggaggatctgtcactatatggtctctttgcgctactttgagatgaccatcctcctg
gtgatcgtggcgagcagcatagcactggctgctgaggaccctgtgtgcaccaactccgac
agaaacaaggtcctccgttatttcgactacgtgttcactggagtgttcacctttgaaatg
atcatcaagatgatagaccagggtctcattctgcacgacggctcttatttccgagatatg
tggaacatcctggatttcatcgtggtggtgggagctctgattgcttttgctttaacgaat
gtgatgggaaacaacaaaggcagagacatcaagactatcaagtctctccgagtgttgaga
gttctgcgacctcttaaaaccatcaagaggcttcctaaactcaaggctgttttcgactgt
gtggtcacatctctgaagaacgtcttcaacatcctcatcgtgtatcagctcttcatgttc
atcttcgccgtgatcgccgtgcagctcttcaaggggaagttcttctactgcaacgacagc
tccatgaattcagagaaggaatgccaaggctactacatcgactacagccgagacaaaaag
gagatgaagagaagagagtggaagagacacgagtttcactacgacaacgtctgctgggcc
ctcctcacactcttcactgtctcaactggagagggatggcctcagatcctgcagcactcc
accgatgtgacagaggatagcatggggccgagtcgggggaaccgcatggagatgtctgtt
ttctacgtggtttactttgtggtcttcccgttcttcttcgtcaacatctttgtggctctg
atcatcatcaccttccaggagcaaggggataagatgattcaggagtgcagtctggagaag
aacgagagggcttgcatagactttgccatcagcgccaagccgatgacccgctacatgccg
cagaacagacaaaccttccagtacagactgtggcactttgtcgcgtcgccctccttcgag
tacaccgtgctcgtcatgatcgcgctcaacactgtggtgctcatgatgaagcaccactcg
gccccgacagcctacgacatggtcctaaagcacctcaacacggccttcactgtcctcttc
tctttggagtgtatgctcaagatcatggcatttggtttggtgaactactttcgagatact
tggaatatttttgatttcatcactgttcttggcagcatcagtgagataattgtggattta
cagtcgttgaacaccatcaacatgagtttcttgaagctattccgagcagccaggttgatc
aagctgctgagacagggttacaccatccgcattctgctgtggaccttcgtacagtctttc
aaggctcttccttatgtctgccttctcattgcgatgcttttcttcatatacgccatcatt
ggaatgcaggtgtttggaaacatcaagctgaacgatgagagtcacatcaatcaacacaac
aattttaagacctttttcggtgcgctgatgctgcttttcaggagtgccacgggggagtcc
tggcaggagatcatgctttcgtgtctgtcgggtcgggagtgtgagccggactcctccatc
ccccccctcatgacgtctccggaccacgtgggggggtgtgggacggacttcgcgtactgc
tacttcgtctcattcatcttcttcagctcatttctgatgctgaatctgtttgtggctgtg
atcatggataactttgagtacctgacgcgagactcctctatcctgggtccacatcacctc
gatgagtttgttcgcatctggggggagtacgatcgcctggcgtgcggtcgtatccactac
actgccatgtatgagacgttaatacacatgtcaccgcccctgggcctgggaaagaaatgt
cctgctaagatcgcctacaagaggttggtgttgatgaacatgcctgtggacgaggacatg
agcgtccacttcacctccaccctgatgtcgctcatccgcacagctttggacatcaaaata
gcgagaggcggtgaggaccgcatcgctctggacagtgaactgcagaaagaggtcagcatc
atttggccttatctaccgcagaagaacctggaccttctggtaccgatcaacaaagatacg
gacatgacggtggggaagatctatgcctccatgatgataatggactacttcaaactgaac
aaagccaagaagctcaggcagcaactcgaggctcagaagagtagcctaatcttcaagcgc
ctggatgcctccacgcttcctgaagacattctgtccaacacccagacgctgccgacaatg
gcccacagcgctggctccgctctgaccagaggaggattgctggctctgagccccatctca
cctgaggagctgtttctgcagcccatcggctctgacactgatgttaaccaggatctgacg
gaggttgcaggtggctccatgaagcgttcagtctccactgttgccgatcagcgggtgaac
ggtctttgggaggaagagcaaagtcctgccagactttatcgacctcgacacaagagctac
aaagctgctgtttctcggtcagagcactggcatcagggcgacagggagcgcggccggtct
aaggagcgctgtcacctcctgtctgatgcgtctcgtggaaactctgaggaaagaagattg
caggcctcacggtcctctagtggagagagagcccaccccaaagataaacagggcaacagc
tcggacagtccggtgccctccacctcagagtccagcacccccaccggccgacgccccgca
gcaaagagctctcgcccgcacatctcctactccccgctgcacccctctgtcgggaaggac
ggggatgagcagcgcagcccagtggccaagaggcggggcaaagccaaacggggcacccaa
gagagggtcctagacgacaggcgaggcgaagaagaacaagacccgtccccacttcgccgc
tacccctcggagccgttcctggcctcccaggagggcgagcacagcccggacccctccggc
cccatggagacgttgaccttcgaggcggccatggcctgcagcctgggacgctcaaacacc
gtcagctcgtcccgtccccgcttgcggaccggctggcaggtccccaacggacactttcga
aagcgtttggcgcaaacaacctcttctgcaggctgtgaccctctcagcgacacggaggag
gacgacaggtgctag
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integrated database retrieval system
