Trematomus bernacchii (emerald rockcod): 117488954
Help
Entry
117488954 CDS
T09643
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117488954
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117488954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
117488954
NCBI-ProteinID:
XP_033994034
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKSLLKRDRFVFPSLLGDAEHLKGFSMDSFLIPGDKTR
AFFAPVSSSSPSSFSLLEPVAQFSTGAVQRMAHEIPHALAAGALPYSAHSFGYQTAGGLG
ALACHGQHSHSHPSPSGPGYVVPCNCSAWSAAGLQPQVAYILFPGGVPKVGMDSYTSPSS
SV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctttagatcacatcaaaagacccatgaatgcgttcatggtgtggtccaga
ggccagaggaggaaaatggcccaggagaacccaaagatgcacaactcagagatcagtaag
agactgggcgcggagtggaagctgctctccgactcggagaagcgcccttacatcgacgag
gccaagaggctgcgggctcagcacatgaaggagcacccggactacaagtaccgaccccgg
cgcaaacccaagagcctcctgaagagggaccgcttcgttttcccgtctttgctcggggac
gcagagcatttgaagggattttccatggactccttccttatccccggggataaaaccaga
gctttcttcgctcccgtctcctcctcctccccttcttccttctcgctgctggagcccgtg
gcgcagttcagcaccggagctgtccagcgcatggcgcatgagatcccgcacgctctggcg
gccggcgctctgccctacagcgcgcacagcttcggataccagactgccggagggctcggg
gctctggcctgccacggacagcactcccacagccacccgtccccctccggccccgggtac
gtggtgccgtgtaactgtagcgcctggtccgcagccgggttacagccgcaggtcgcctac
atcctcttccctggaggagtgcccaaggtcggcatggactcgtacacttcccccagctcc
agtgtgtga
DBGET
integrated database retrieval system
