Trematomus bernacchii (emerald rockcod): 117489045
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Entry
117489045 CDS
T09643
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117489045 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117489045 (gtf2b)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117489045 (gtf2b)
Prokaryotic type
Archaeal type
TFB
117489045 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
117489045
NCBI-ProteinID:
XP_033994170
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MASTSRGDALALPRVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGSASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPTDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacaagccgcggagatgccctcgcccttcccagagttcagtgtcccaaccac
cctgatgccatcctggtggaggactacagagcaggggacatgatctgccccgaatgtggc
cttgtagtaggtgaccgtgtaatcgacgtcggctcagagtggagaaccttctccaatgag
aaagctctcaaagatccctccagagtgggagatgctcagaaccccctgctcaacggggga
gacctcaccaccatgatcagcaagggaaccggctccgctagtttcgatgagttcggtaac
tccaagtaccagaaccggcggaccatgagcagctcggaccgggccatgctcaacgccttc
aaagagatcaccaccatggccgaccgcatcaacctgccaaggaacatcatagacagaacc
aacaacctgttcaagcaggtctatgaacagaagagcctgaagggccgagccaacgatgcc
atcgcctccgcctgcctctacatcgcctgcagacaggaaggagtaccgaggacgttcaaa
gagatctgcgccgtctcccggatctccaagaaggagatcggcagatgcttcaagctgatc
ctgaaggcgctggagaccagcgtggacctgatcaccactggagacttcatgtcccgcttc
tgctccaacctgggcctgcccaaacaggtgcaaatggcggccacctacatcgccaggaag
gcggtggagctggacttggtgcccggcaggagccccatctctgtggctgcagcagccatc
tacatggcctcccaggcctccgccgagaagaagacccagaaagaaatcggggatattgcc
ggcgttgcagacgttacgatccgacagtcataccgcctcatctacccccgcgccgcagaa
ctcttccctacagacttcaaattcgacacacccgtcgacaagctgccccaactgtga
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