Trematomus bernacchii (emerald rockcod): 117489178
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Entry
117489178 CDS
T09643
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117489178 (sox3)
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117489178 (sox3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117489178
NCBI-ProteinID:
XP_033994247
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MYNMMETELKTPLPQSNQGPGAKNNSGTDQERVKRPMNAFMVWSRGQRRKMAQENPKMHN
SEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLP
GGLLAPGVNSVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQMHR
YEMAGLQYPMMSSAQTYMNAASTYGMSPAYTQQTSSAMGLSSMASVCKTEPSSPPPAITS
HSQRACLGDLRDMISMYLPPGGENAEHSSLQGSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagaccccgctcccgcagtctaaccaggggccg
ggcgctaagaacaacagtggcaccgaccaggagcgtgtgaagagacccatgaacgccttc
atggtctggtcccggggacagcgaaggaagatggctcaagaaaaccccaaaatgcacaac
tctgaaatcagcaagcgactcggtgctgactggaaacttctgaccgacgctgaaaagaga
ccattcatcgatgaggccaagcgtctacgcgccatgcacatgaaggagcatccggattat
aaataccgtccccgcaggaagaccaagaccttgctcaagaaagacaagtattctttgccc
gggggactgttggcgccaggagtcaactccgtcaacaactccgtgtcggtggggcagcgg
atggacggttacgcgcacatgaacggctggacgaacagtgcgtactccctcatgcaggac
cagctggcctaccctcagcatcacagcatgaacagcccccagatccagcagatgcaccgg
tacgagatggcggggctccagtacccgatgatgtcctcggcgcagacctacatgaacgca
gcttccacgtacggcatgtctccagcttacacgcagcagacctccagcgccatgggactg
agctccatggcgtccgtgtgcaagaccgagcccagctcacctccgccggccatcacatcc
cactctcagcgggcgtgtttgggggacctgagggatatgataagcatgtacctgccaccc
ggcggggagaacgcggagcattcctccctgcaaggcagccgattacacagcgtccatccg
cactatcagaccgcagggactggcgtcaatggcacgctacctctcacccacatctga
DBGET
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