Trematomus bernacchii (emerald rockcod): 117489249
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Entry
117489249 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117489249
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117489249
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
117489249
NCBI-ProteinID:
XP_033994336
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MVVTQKFSSSLNSCIRMQQQRAGPEAGPEAGPEAGPGPEAGPEPGPEAGPGPGPEPEPAD
GPGSSCVSMKSDRSMDHPLTFKSGRPAEGRKQRKKKRPKRKPKPGPEDGPGPGSSCVSMK
SDRSMDPPIVFKSGLPAEGRIQRPGPGPGPGSSCVSMKSDFSMESPPYFKAGQSADESLR
IQQQRPGPGPRCESMKSDFSMQSPMNFKAGQSADERVLQEFSEVPSDQSAPKHHTDLDSI
FMLLEENIVTFVKNELKKIQKALSSDYPEGLESQSEEEERLDGEDEEQRSSREAFLNISV
HFLRSMKQEELAERLQSRTPAAVCSKLKSTLKERFQCVFEGIAKAGNQTLLNQIYTELYI
TEGGSAEVNKEHEVRQIETASRKPHRPETPIRREDLFKASPGRDAPIRAVMTKGVAGIGK
TVLTQKFTLDWAEGKANQDFQFIFPFTFRELNVVRENKYSLVELVHHFFSETRDAGICRF
DQFSVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRP
AAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDQKQAGTIISHIKTSRSLHIMCHIPV
FCWISASVLEEVLKTREGGQLPNTLTEMYIHFLVVQSKVKNIKYHGGAETDPHWSPESRK
MMESLGKLAFEQLLKGNLIFYESDLTECGIDIRAASVCSGVFTQVFREERGLYQDKVFCF
VHLSVQEFLAALHVHLTFINSGVNLLKEKPTTSQQYEVKLTLTNLYQSAVDQALQSPNGH
LDLFLRFLLGLSLQTNQKLLRGLLTQTGSGLGTNQKTVKYIKKKIDKDLSPERSINLFHC
LNELNDHSLVEQIQQSLRSGRLSEEKLSPAEWSALVFILLSSEEDLDVFDLKKYAASEEA
LLGLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLRDLDLSYNDLQDSGVKLLSA
GLESPHCELETLRLSGCLVREEGCVSLASALSSNPSHLRELDLSNNHPGDSGEKLLSAGL
EDPLWRLETLRMDHGGLQWLKPGLRKYACELELDTNTVNRNLKLSDNNRTVTYVRYEEQV
YPFHPERFDFYVQLMCREALTGRCYWEVEWRGVVFISVTYREISRRGKREDCEFGRNDQS
WTLECSDGRYSVRHNKTGTFLSTSSHSSSGRVAVYLDHAAGSLSFYRVSSGTLIHIHTFR
ATFTKPLYAGFGTGPHGASISLVPLQV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgacgcagaagttttcctcgtcgttaaactcttgtattaggatgcagcagcag
agagctggacctgaagctggacctgaagctggacctgaagctggacctggacctgaagct
ggacctgaacctggacctgaagctggacctggacctggacctgaacctgaacctgcagat
ggacctggatccagctgtgtgtccatgaagagtgacaggtctatggatcaccctcttacc
tttaaatctggacgtcctgcagagggaaggaagcagcggaagaagaagagacctaaacgt
aaacctaaacctggacctgaagatggacctggacctggatccagctgtgtgtccatgaag
agtgacaggtctatggatccccctattgtctttaaatctggacttcctgcagagggaagg
atccagagacctggacctggacctggacctggatccagctgtgtgtccatgaagagtgac
ttttctatggagtctcctccttactttaaagctggacaaagtgctgatgaaagtctcagg
atccagcagcagagacctggacctggaccccgctgtgagtccatgaagagtgacttttct
atgcagtctcctatgaactttaaagctggacaaagtgctgatgaaagagttctgcaggag
ttctccgaggttcccagtgatcagtctgccccgaagcatcacacagacctggactccata
tttatgctgctggaggagaacatcgtgacttttgtgaagaacgagctgaagaagatccag
aaggctctgagttcagattacccagaaggcttagagagtcagagtgaggaagaggagcgg
ttggacggtgaggatgaagagcagaggagcagcagagaggcatttctgaacatctcagtg
cacttcctgaggagcatgaagcaggaggagctggctgagcgtctgcagagcagaactcct
gctgcagtgtgcagtaaactcaaatccaccctgaaggagaggttccagtgtgtgtttgag
ggcattgctaaagcaggaaaccaaacccttctgaaccagatctacacagagctctacatc
acagagggggggtctgcagaggtcaacaaggaacatgaggtcagacagattgaaactgca
tccaggaaaccacacagaccagaaacacccatcagacgagaagacctctttaaagcctca
cctggaagagatgcaccaatcagagcagtgatgacaaagggcgtggctggcattgggaaa
acagtcttaacacagaagttcactctggactgggctgaaggcaaagctaaccaggacttc
cagttcatatttccattcaccttcagagagctgaatgtggtgagagagaacaagtacagc
ttggtggaacttgttcatcacttcttctctgaaaccagagacgcaggaatctgcaggttt
gatcagttctcggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttccacaacactgagatcctgactgatgtcacagagtccacctcagtggatgtgctgctg
acgaacctcatcagggggaagctgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgtggacatggtgacagaggtccgagggttc
actgacccacagaaggaggagtacttcaggaagagattcagagatcagaagcaggccggc
accatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtc
ttctgctggatctctgcttcagttctggaggaggtgttgaaaaccagagaggggggacag
ctgcccaataccctgactgagatgtacatccacttcttggtggttcagtccaaagtcaag
aacatcaagtatcacggaggagctgagacagatccacactggagtccagagagcaggaag
atgatggagtctctggggaaactggcttttgagcagctgctgaaaggcaacctgatcttc
tatgagtccgacctgactgagtgtggcatcgatatcagagcagcctctgtgtgctcagga
gtgttcacgcaggtctttagagaggagagaggactgtaccaggacaaggtgttctgcttc
gtccatctgagcgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaac
tctggagtcaacctgctgaaagaaaaaccaacaacctcccagcagtatgaggtcaaactt
acactaacaaatctctaccagagtgctgtggaccaggccttacagagtccaaacggacac
ctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagaaactccta
cgaggcctgctgacacagacaggaagtggcttggggaccaaccagaaaacagtcaagtac
atcaagaagaagatagataaggatctgtctccagagagaagcatcaacctgttccactgt
ctgaatgaactgaatgatcattctctagtggagcagatccaacagtccctgagatcagga
cgtctctctgaagagaaactgtctcctgctgagtggtcagctctggtcttcatcttactg
tcatcagaagaagatctggacgtgtttgacctgaagaaatacgctgcttcagaggaggct
cttctggggctgctgccagtggtcaaagcctccaacaaagctctgttgagtggctgcaac
ctctcagagagaagctgtgaagctctgtcctcagtcctcagctcccagtcttctagtctg
agagatctggacctgagttacaacgacctgcaggattcaggagtgaagctgctgtctgct
ggactggagagtccacactgtgaactggagactctcaggctgtcaggatgtctggtcaga
gaggaaggctgtgtttctctggcttcagctctgagctccaacccctcccatctgagagag
ctggacctgagtaacaatcatccaggagactcaggagagaagctgctgtctgctggactg
gaggatccactctggagactggagacactcaggatggaccatggtggactgcagtggttg
aaacctggtctgagaaaatatgcctgtgaactggagctggacacaaacacagtaaacagg
aacctcaaactgtctgacaacaacaggacagtgacatatgtcagatacgaggagcaggta
tatccttttcatccagagaggtttgacttctacgtacagctgatgtgtagagaagctctg
actggtcgctgttactgggaggtcgagtggagaggagtggtttttatatcagtaacttac
agagaaatcagcaggagaggaaagagagaggactgtgagtttggaaggaatgatcagtcc
tggactctggagtgctctgatggtcgttactcagtcaggcacaataagacaggaacattc
ctctccacctcctcccactcctcctctggtagagtagcagtgtatctggatcatgctgct
ggctctctctccttctacagagtctcctctggcacactgatccacatccacaccttcaga
gccacattcactaaacctctctatgctgggttcgggactgggccacatggtgcctcaata
tctctggttcctctgcaggtctga
DBGET
integrated database retrieval system
