Trematomus bernacchii (emerald rockcod): 117489258
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Entry
117489258 CDS
T09643
Symbol
rffl
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117489258 (rffl)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117489258 (rffl)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117489258 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
zf-RING_5
MUG2_C
SDE2_2C
PRCC
Motif
Other DBs
NCBI-GeneID:
117489258
NCBI-ProteinID:
XP_033994355
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MFASCCSWFCLDSGGVDQLSAEERRHQSYTNSGFNSQAPPPPSPELTCKACGAELDTPAK
KHVCVDCKKDFCSRCSTHLEPRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVS
THLCREKEELVELVLGRQPSPSSPPDTMTSDPPSVTSDPPDVAASPPDPPAPTPDPPAAE
PEAPPPPTGPAPAAEPEVQEEDQAWDPEEAPVSGRRASLSDLSSVDDIEALSVRQLKEIL
ARNFVNYKGCCEKWELMERVVRLYQDQQNLQAANAVNASESAGAGSAGPEENQCKICMDS
PIDCVLLECGHMITCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgtcgtgctgcagctggttctgtttagactcaggtggagttgatcagctgtct
gcagaagagcgtcgtcaccagtcttacacaaactcagggttcaacagccaggcgccgccc
cccccctcacctgaactcacctgtaaggcctgcggggcggaactcgacacacctgccaag
aagcatgtgtgtgtggactgtaagaaagacttctgcagccgttgctccacccacctggag
ccccgcccccgcctctgtcacacctgtcagcgtttctacggcaacctgctggagagggcg
gagctaatgaagctgaaggtgaaggagctgcgggattatctgcacctgcacgaggtttcc
acgcacctgtgcagagagaaggaggagcttgtggagctcgtccttggccggcagccttca
ccatcttccccccccgacaccatgacctctgaccccccgtcggtgacctctgacccccct
gatgtcgccgcctcgcctccagacccccccgccccgacgcctgacccccccgctgcagag
ccggaagccccgccccctcccacaggccccgcccccgccgcagagcccgaggttcaggaa
gaagaccaggcgtgggacccggaggaggcgcctgtttccggccgccgggcgtcgctctca
gacctgagcagcgtggacgacatcgaggcgctcagcgtgcggcagctgaaggaaatcctc
gccagaaactttgtgaactacaaaggctgctgtgagaagtgggagctgatggagcgggtg
gtccggctgtaccaggaccagcagaacctccaggctgccaacgctgtgaacgcctcagag
tccgctggtgctggttctgccggtccggaggagaaccaatgtaagatctgtatggactct
cccatcgactgcgtgctgctggagtgtggtcacatgatcacctgcacaaagtgcggcaag
aggatgagcgagtgtccgatctgccggcagtacgtggtgcgagccgtccacgtcttccgg
tcctga
DBGET
integrated database retrieval system
