Trematomus bernacchii (emerald rockcod): 117489273
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Entry
117489273 CDS
T09643
Symbol
zgc:162872
Name
(RefSeq) LOW QUALITY PROTEIN: BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117489273 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117489273 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117489273 (zgc:162872)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117489273 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117489273 (zgc:162872)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117489273 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_5
BAR
PH_11
PH_8
Mu_AP3
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
117489273
NCBI-ProteinID:
XP_033994369
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MDSLLDFEECVKDSPEFRLKLELFEADVNVLETHLDKVMKLCGKMVEAGQVYNAANQLFL
SGLAELSMFHQKDSVINNCLNQFNQGLQEMISFHTILFDQTQRAISQQLTNLCTQFLPQL
LDTRREFLRIGGDLDSAALKNSQVSRHRATDAERASHLLLATRKCYQHFALDYCLQLNTF
KTQQRLDVLNSVFSFVHAQFTFFHQGFDLLRDLEPTMKTMAAQLSQLSADCAAKRKELEN
THLLVQQRDASGEPLVVPCPGSEDLIQGYLFKRSRRKTKTWKRGWFSIRDNQLIYRKSHK
EASVVLFEDLRLCAVKSLENIDRRFCFDLLSVQKSCALQADSEEVKQSWLEALQGSIDLA
YRQPKEAPPPQGGGDSSXPAPPPQRQSVLGEAFRAPGNMLCCDCGEEEPRWASINLGVTV
CIQCSGIHRSLGVHLSKVRSLTLDSWEAEQLKLLCILGNNVVNRIYEARCSDEGRVKPRS
DSSRSEKEAWIKEKYVEKRFVQSSSEGAGKAAAGRRLYRAAMAGDLVAMAAALAEGSEVN
GSIGEDGGGRTPLIGAAIGGSLLACEFLLLNGAKVNHRDLRGQGALHAAATAGHTGQVCL
LLKRGANQYAVDERGQDPLAIAVETANADIVTLLRMARMNEEMRDSEGVFGAIRDDETFQ
DIFRDFSDMASHDPERLSRRKFSREGQEEEEEEKRGRRGETVNSVTKTTQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggactcgctgctggactttgaggagtgtgtgaaagactcacctgagttcagattgaag
ctcgagctgtttgaggcggatgttaatgtgctcgagacacacctggacaaggtgatgaag
ctgtgcggcaagatggtggaagcgggacaagtgtacaacgcagccaatcagctgttcctc
tccggcctggctgagctctccatgttccaccagaaggacagcgtcatcaacaactgtttg
aatcagttcaaccagggcctgcaggaaatgatcagcttccacactattttgttcgatcag
actcagcgagccatcagccagcagctgaccaacctctgcacacagttcctcccccagctg
ctcgacaccaggcgggagtttctgcggatcgggggggatctggactcggcggcgctgaag
aactctcaggtttctcgccacagagcgacggacgcagagcgagcgagtcacctgctgctc
gccaccaggaagtgctaccaacacttcgccctggactactgtctgcagctcaacaccttc
aagactcagcagagattggacgtcttaaactcagtgttctccttcgtccatgctcagttc
accttcttccatcagggcttcgacctgctgcgagacctggagcccaccatgaagaccatg
gccgcccagttatcacagctgtccgcagactgcgctgctaaaaggaaagagctggagaac
acacacctgctggtgcagcagagggacgcttcaggggagccgctggtcgtcccgtgtccc
ggcagcgaggatctgatccagggttacctcttcaaacgctcccgcaggaaaaccaagacc
tggaagagaggctggttttccatcagagacaaccaactgatttacagaaagtcacacaag
gaggcgtcggtggttttgttcgaggatctgcgactgtgtgccgtcaaatctctggagaac
atcgaccggcgcttctgcttcgatctgctctctgtgcagaagagctgtgctctgcaggcg
gattctgaggaggtgaagcagtcgtggctcgaagctctgcagggaagcatcgacctcgcc
tacagacagcctaaagaggctcctccccctcagggtgggggcgactcctccnncccggcc
cccccccctcagaggcagtctgtgctgggcgaggcgttcagggcccccgggaacatgctg
tgctgcgactgtggagaggaggagcctcgctgggcctccatcaacctgggggtcaccgtc
tgcatccagtgctccggcattcaccggagtctgggagtccacctgtccaaggtgaggtct
ctcactctggactcctgggaggcagagcagctgaagctgctgtgtattctgggtaataac
gtggtgaacaggatctacgaggctcgatgttcggatgaaggacgagtcaaaccccgatcc
gacagctcgagatcagagaaagaggcgtggatcaaagagaaatatgtggagaagagattt
gtgcagagcagctcagagggagcggggaaggcggcggccgggcggcgtctgtaccgggcg
gccatggcgggggatctggttgccatggcagcggcgttggccgaggggtctgaggtcaac
gggagcatcggcgaggacgggggggggcgaaccccgctgataggagccgctatcgggggc
tctctgctggcctgtgagttcctgctgctgaacggagccaaggtcaaccatcgagacctc
agaggacaaggagcgctgcacgctgctgccaccgcgggacacaccggtcaggtgtgtctg
ctgctgaagagaggagccaatcagtacgcggtagacgagagggggcaggacccattggcc
atcgccgtggaaacagccaacgctgacatcgtcacgctacttcggatggcccggatgaac
gaagagatgagagactcagagggagtgtttggagctatacgagacgacgagacgtttcag
gatattttccgggacttcagcgacatggcgtcccacgaccccgagaggctcagcagacgg
aagttcagccgcgaaggacaggaggaagaggaggaagagaagagaggaagacgaggagaa
acggtgaacagtgttacaaagacgacgcaatga
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