Trematomus bernacchii (emerald rockcod): 117489339
Help
Entry
117489339 CDS
T09643
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117489339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117489339
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117489339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117489339
NCBI-ProteinID:
XP_033994443
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MADSLGQLCYLPPKASSQKVTERGKWGSKKEFILSVAGAIIGLGNVWRFPYLCYKNGGGA
FFIPYILFLVTCGVPLFILEVSLGQYTSQGGIMCWRMVCPLLEGIGYASQIIIFYGCISY
VVILAWAFLYLFASFSAELPWATCNNTWNTDSCVVLNNFNATANWTSSVNASSSILEFWQ
RRVLNISTGIEALGNIQGDLALYLFLAWALCYFCVWKGVRSTGKAAYFTATFPFIMLVVL
FIRGMTLPGAIHGIKYYLYPNLTRLVEPQVWMDAGTQIFYSYAICLGCLTTLGSYNKYNN
NCYRDSFYLCLLNSGTSFISGFAIFSVLGYMSQKQGVDIASVADSGPGLVFIVYPQAVTL
LPFPQAWSVCFFVMIILLGIDGQFVGLESLMTSLSDVYPSQIRKGYRRELLLLLICAVSY
MLGLVLVSQAGAYILQIFDHYVCSGPTLLLMAIFQSVIIGWIYGADRFCDNIEDMIGYKP
MSLLKYCWMYATPLICSGTLVFMLLKYTPLKFNNSYVYPWWAYWIGWFLAMSSLSMIPVT
MVCKLAKEKGTLWQRINSCSQPADDLTMRTTRNASISASLQAPDAGQNIKV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctctgggccagctgtgctatctccctcctaaggcttcttcacaaaaagtc
acagagcgtggcaaatggggcagcaaaaaggagttcattctgtcggtggctggtgctatt
attggactgggaaatgtgtggagatttccatatctgtgctacaaaaatggtggtggtgcc
ttcttcattccttacatcctgttccttgtgacctgtggtgttcctctgttcatactggag
gtatccctgggccagtacaccagtcagggaggaatcatgtgctggagaatggtctgtccc
ttgttggaaggcataggatacgccagccaaattatcattttctatggctgtatcagctac
gttgtgattttagcctgggcttttctctacttgtttgcctcattctctgctgagctgcca
tgggccacatgcaataacacatggaatacagattcttgtgtggtattgaacaactttaac
gccactgctaactggacctcgtctgtgaatgcatcatcgtctatactagagttttggcaa
cgacgagtgctgaatatctccactggcatagaggcattgggaaacatacagggggacctt
gctttgtacctttttctggcctgggccctctgctacttctgcgtctggaagggagtgaga
tccacgggaaaggctgcctacttcacagccacgttccccttcatcatgctggtggtgctg
tttatcagaggaatgacgcttcctggagccatccatggcatcaagtactacctgtacccc
aatctcacacggctcgttgagccacaggtttggatggatgctggaacccaaatattttat
tcctatgccatttgtctgggatgcctgactacgcttgggagctacaacaagtacaacaac
aactgttacagagactccttctatctctgcttgttaaacagcgggaccagctttatatct
ggatttgccattttctcagttttgggctacatgtcacaaaaacagggtgtcgacattgct
tcagttgccgattcaggccccggccttgtgttcatagtctacccacaagctgtgaccctt
ctgccatttcctcaagcctggtccgtctgcttcttcgtcatgatcatcttgttaggaata
gatggacagtttgttgggcttgaaagtctcatgacctctctatcagacgtctacccatcc
cagatccgaaaaggatatcgcagagagcttcttctgctgctgatctgtgctgtctcctat
atgttaggcctcgttttggtgtcacaggctggagcatacattctgcagatatttgatcac
tatgtatgcagtggtcccactctgcttctgatggcaatcttccagtctgtgattattgga
tggatctatggtgctgaccgcttctgtgacaacattgaggacatgattgggtataaacct
atgtccctgttaaagtactgctggatgtatgccacgcctcttatttgcagtggcacactt
gtgtttatgctcctgaaatacacccctctgaagttcaacaactcctacgtgtatccttgg
tgggcatactggatcggctggttcctggccatgtcatctctctcgatgattcctgtgacc
atggtctgcaaactggccaaagaaaaaggaactctctggcagcgtatcaattcatgctcc
caacctgcagatgatcttacaatgaggacaacgagaaatgcaagcatcagcgcctccctg
caagcccctgatgctggacaaaacatcaaagtgtaa
DBGET
integrated database retrieval system
