Trematomus bernacchii (emerald rockcod): 117489342
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Entry
117489342 CDS
T09643
Symbol
rereb
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117489342 (rereb)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117489342 (rereb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
CCDC47
Myb_DNA-binding
Myb_DNA-bind_7
DUF7573
Motif
Other DBs
NCBI-GeneID:
117489342
NCBI-ProteinID:
XP_033994446
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MDDLFSPRRSLNSTQGEIRVGQSHQAKLPELQPRPVPSLQTQTEREDLMWTPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNMLHASHYDAAKALQRLVKKPL
PKLIEKCWSEDDVKRFIKGLRQYGKNFFRIRKDFLPSKKTGELITFYYHWKKTPEAAGTR
AYRQQRRQPSSRKAKTRSAAVPVTPSLNYSVDVSSASEDDLDSEDSEQEIKSCSHCGASS
SKDWHHGRRDTSLLCTTCHTHESKHGSLPPASKSAVAPFLFKPVKEEEEVNNKHGMRTRR
SRAPLSSLRSGHRRLTGSPTSEDQQSSSQPSPSGATSNSLRSSSTDNKNESSKKTNKKIK
EEVTSPKTTKRVRESPAQGPEEPEKVTPKRPKTQDPRGSRSEGEAEVEEESSSESRSAQD
DGSSDTKDIDQDNRSSSPSISSPQQGNESDSDSSAQPGGILPEPAAAAAGGPADPPALQA
IPSQGHPILHQPPQSTPPADGAQSPPPASPDPPQPAAGQPAGPNARPQPAPHALSGPPPL
PPALGQDCPLSPAFQVPPALNSAQPLQTHGPSAQALQRPPPFFRESQLPQPSLSGSQIKP
PPTTPIPSSHKQGPHNQSSTPFPQMPSNLPPPPALKPLNSLPNPHPPGAPPPPLQLMPQP
LPMQSLPTQLPVLSQVQTHPGKSMTSSHPPAAASLPLPPVTSSAIGPVPSLQPSYPPLRP
SPSTAAGCSQIQIKEEPLDEMEEAESPPPPSRSPSPEPTIINMASHASQSARFIKHLDRG
YNSCSRTDLFFTPLTASKLAKKREEAVEKLRRDAEHSARQEREREKDRERDREREADRNA
VSRASSSSHDSRMSDVQMTVHGHGRPSFEQPPTTVAAVPPYIGPDTPALRTLSHYARPHV
MSPSNRNHPFYVSLSPGDPLLAYHMPGLYGADPNLRERELRNLRERELHERMKPGYEVKP
PEMEMLHQSANPMEHFARHGAIGLPHIPGPPHHFAQFHPGLNHMERGMVLAAPQLRPELS
YAERLTAERLHAERMASVGADPAARLQMLNVTPHHHQHSHIHSHLHLHQQDPLGQGDVGA
FHCYDERCQNPHPLDPLQGGPRLARYPFPGGPIPNALLGDLPHDHEMLRHPLFGAYQREM
QGQIPQMSAAHQLQAMHAQSAELQRMAMEQQWLHAHHMHGGQLPSQEDYYSRLKKEGDKP
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgttcagtccgcggaggagcctgaacagcacacagggagagataagagtg
ggacaaagtcatcaggccaaactcccagagttgcagccgcggcccgttcccagtttgcag
actcagacggagagggaggatctgatgtggacgccgggggtcaatgactgtgaccttctg
atgtacctcagagcggccaggagcatggcagcgtttgcagggatgtgtgacggtgggtca
acagaggatggatgtcttgcagcctcccgtgatgataccacactcaacgcactcaacatg
ctccatgcgagtcactatgatgcagcaaaagctctccagcgcctggtgaagaagcctctg
ccgaagctcattgagaaatgctggtctgaggatgatgtgaaacgcttcatcaaaggcctg
agacagtatggaaagaatttcttccgcatccggaaagactttctgcccagcaaaaagact
ggggagctgatcacgttctactaccactggaagaaaactcctgaggctgcgggaactaga
gcttatcggcagcaacgtcgacagccgtcctcccgcaaagccaagactcgctctgcagca
gtccccgtaaccccatcgctgaattattcagtggatgtgagttctgccagtgaagacgat
cttgacagtgaagacagtgaacaggaaatcaagagctgcagccactgcggtgcatcaagt
tctaaggattggcaccatgggcggagagacacctcgttgctgtgcacgacctgccacacg
cacgaaagcaaacatggaagtctgccgccagcttctaaatctgcagtcgctccattcctg
tttaaacctgttaaagaggaagaggaggtgaacaacaagcatggcatgaggacacgacga
agcagagcacctctttcatctttgagaagtggccacaggaggctcacgggctcccccacc
agtgaggatcagcagtccagcagccagccctcccccagcggagcgacttctaattcgctg
agatcttcttccacagataataagaacgaatccagcaagaagacgaacaagaagataaaa
gaagaggtcacatcaccaaagacaacaaagcgtgtacgggagagtcctgctcaggggccg
gaagagcctgaaaaagttactcctaaaaggccgaagacacaggatcctcggggctcgcgg
tccgagggcgaggccgaggtggaggaggagagctcttcagagagccgcagcgctcaggac
gacggcagcagcgacaccaaagacatcgaccaggacaaccgcagctcctcccccagcatc
tccagcccgcagcagggcaacgagagcgactccgactcctcggcccagcccggggggatc
ctgccagagccggctgctgctgctgcgggggggccggctgaccctccagccctccaggcc
atcccctctcagggccatcccatccttcatcagccaccacaaagcactcctcctgctgat
ggcgctcagagcccccctcctgcctctccggacccccctcagcccgctgccggtcagcca
gctggaccaaacgcccgcccacagcccgcccctcacgctctctctggtccccctcctctt
ccgccagcactcggtcaggattgtcctctgtctccagcatttcaggtccccccggctctc
aactctgcacagcctctgcagacccatggcccgtcggctcaggccctccagagaccccca
cccttctttagggagtctcagctcccccagccttctctctctggctctcaaatcaagccc
cctcccaccactccaatcccaagttcacacaaacagggtccacataatcagtcttctaca
cctttccctcagatgccttccaatctcccccctccccctgctctgaagcccctcaattct
ctgcccaacccgcatcctccgggcgccccgccgcccccccttcagctcatgccacagcct
ttgccaatgcagtcccttcctacccagctgccagtgctctctcaggtgcagacccaccct
ggaaaaagcatgacttcctctcacccgccggcagcagcctcacttcctctcccccctgta
acatcttctgctattggtccggtcccgagcctccagccgtcatatccacctctgagaccc
tcgccgagcacggcagcaggatgttcacaaattcagattaaagaagagccactggatgag
atggaagaggctgagagcccaccgcctccatctcgcagcccctcgccggagcccaccatc
atcaacatggccagccatgccagccagtctgcacggtttatcaaacacttggatcgtggt
tacaactcctgttccagaacagacctgttcttcactccacttacggcctccaagctggcc
aagaaaagagaggaggcggtggaaaagttgaggagagatgctgagcacagtgctcgacaa
gaacgtgaaagggagaaagaccgtgagagagacagagaaagggaggcagacagaaatgca
gtgagtagagcctccagctcctcccacgacagtcgtatgagcgatgttcagatgacggtt
cacggccacggacgcccctcctttgagcagccgcccaccactgtggctgctgtgcccccc
tacatcggccctgacacacccgccctgcgcaccctgagtcactacgcccgaccccatgtc
atgtcgccatcaaaccgcaaccacccgttctacgtgtcgctgagccccggcgaccccctg
ctggcctaccacatgccgggcctgtacggcgctgaccccaacctcagagagcgcgagctc
aggaacctgcgcgagagggagcttcacgagaggatgaagcccggctatgaggtcaagccc
ccagaaatggaaatgctacaccaatctgccaaccccatggagcactttgccagacacggg
gccatcggtctcccccacatccccgggcccccccaccacttcgcccagttccatcccggg
ctgaaccacatggagcgagggatggtgctggctgcgcctcagttgcgccccgagctgagc
tacgcagagcgactcactgcagagcggctccacgcagagaggatggcgtctgtaggggcc
gaccccgccgccaggttgcagatgctcaatgtgacgccgcaccaccaccaacactctcac
attcactcccacctccacctgcaccagcaggatccgcttgggcaaggtgatgttggagct
tttcactgctatgacgaaagatgtcaaaaccctcatcctctggaccctctgcaaggaggc
ccacgtttggcccgctaccccttccctgggggcccgatccccaacgctctactgggcgat
ctccctcatgatcatgagatgctgcgccacccactgtttggagcatatcaacgagagatg
cagggtcagattcctcagatgtctgctgcccaccagctccaggcgatgcatgcccagtct
gcagagctgcagaggatggcgatggagcagcagtggctgcatgcgcatcacatgcatgga
ggccaactcccgagtcaggaagattactacagccgtctgaagaaagaaggtgacaagcca
tcttga
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