Trematomus bernacchii (emerald rockcod): 117489379
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Entry
117489379 CDS
T09643
Symbol
znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1 isoform X1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117489379 (znfx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
ZNFX1
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
Viral_helicase1
DEAD
ResIII
UvrD-helicase
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
117489379
NCBI-ProteinID:
XP_033994489
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MEVPTLLNNDADTGPNESAHRVRNRRQGRSLNHGSGEPVREDTDEGGGGGGVGMRWRGRA
ADSGRGRGAADSGRGRGDAGRRRGEAGRGRGDAGRGRGESGRGRGDGGRGESGRGDAGRG
RGATHASRGERKDLGARPKVGGRGIGGDKGQGWESEVGVRREDHSADGRRGERRDGARGR
QEHNGGRSKSTGRVGAHHGHGLSYKTLEELSEKDPSVVAITLSSKPVLRELLGGTTMRND
LVGLLCLVLSKAFESRAERGTLQHLAGIIKESDFFSTVLPRYLVGMSSEFNPIRRAQYPQ
DLKNILAILSEVINTFPASSVNSVTLLLTLIPASVCSLRTSGVDIQPEIEERVESIQGLI
KHLQEKSRDGTLRSDRDHYALLPTAGEEDQQDFRTISIYPTPEEFHQEERPFLRPNLTSQ
RYASTHLYLDTHFRLLREDFVRPLREGVQHLLRSKMEKGDKPLKTKRFDDIRIYFDTKLV
VPKCTNNGIAYIVQFDIQPLKFVRWENSKRLIFGSLVCLSCDDFESFLLATVSDRDPKEL
AKGQVQIAFTAESRFKLAEMEKDQLFLMIETTAYFEAYRYVLEGLQEQNEDKLPFQRYIV
ECNKDVFRPAYLQLEDVYDLSDVALPQHKRSLKPFVSLNPQAWPQMTKLGLDDSQMKAFQ
LALTKELTIIQGPPGTGKTHVGLKIARALLANRKLWSDGLDRTPMLVVCYTNHALDQFLE
GIHTFLPKGIVRVGGRSNSEILKQFNLRELTRSPDFRHSLPSHLRFAFNEVYKELCQQER
DIQSESMKLECSLKGVLREDFLQEFISDIHWDSLREQPTQDGFLIWGEKKKPSQMMEWLG
LGSTVFLQRETENANGNEAADEEMELDDGDDLLYIPEEADLIQAERIVEDNIGPRGGRDG
KKKDEMAETLRALEDLMLAMNLEETEIQAEQSEAGWEMQRAQKKKLKHKIMRELRNSSAM
TAEEEKAVLDIWTLSRPDRWRLYRLWMARYRVALSTRALRSEQAYQNAVDRLADIKREEN
VHLLKGATVIGMTTTGAAKFRKVLQKVRPRLVIVEEAAEVLEAHTITTLSEACQHLILIG
DHQQLRPSATVYELARNHNLEMSMFERLVKMGLPYVRLDYQHRMRPEIARLLTPHIYEEL
ENHPSVFDYENIKGLSTNLFFVEHNYREQEIQDGKSHQNQHEANFVVALCRYLILQDYEP
EKITILTTYTGQLHCLRNLMPAKEFTGVKVHVVDKYQGEENDIVLLSLVRSNLQGKVGFL
NIPNRVCVALSRAKKGLYCIGNSEMLGKVQLWSNIFHTLRQSDQIGDALTLYCQNHPDRQ
VKASCADDFKQAPEGGCKKPCEFRLVCGHVCTRVCHPYDPEHKKYECHKKCQKTMCDLGH
RCPLDCYKECPEKCIVKVEKIIPRCQHTQMVPCHQDPETFVCQEPCKKLLDCEHPCVSFC
GEPCTSYCKQEVTLTLKCGHSQQGECFYNDSKDKPQCRTPCVEQLKCGHACKGNCGKCNQ
GRFHYSCSQKCDRLLICSHKCMEPCTSDCPPCLKPCENCCVHSKCMKPCGQPCAPCIEPC
AWQCPHLSCSKLCHEPCDRLPCNQPCASTLDCGHPCIGLCGDKCPSKCRICHHDVVTEIF
FGTEDEPDAYFIQLEDCGHIVEYTAMDQYMEMDDKQQANEAEQVAIKLKECPRCRTSIRK
NLRYGSHINRCLAEIEMVKVKINGRRVDIKEHRQALQNQWEGNLLQYEMHDHVEYMAVKL
VQPYLTAKDLWVLENKMDFLIRIAKLKKIQKGNMSELNSETLGEYFVEFVRWLNNWRQKF
SDQQVFDLQRELQRLTFLTELNARCHKADIRKLTDKINSEIQTIREVLERIGPFTEQDQD
RVKEAMEELDSKLPPSGLGISEEERKMIVSAMKIAPGHWYKCPNGHVYVITECGGAVESR
RCADCAATIGGENHALAGGNQVASEMDGAQHPAWSEANNLLNFDQVDF
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaccgaccttactaaacaatgatgctgatactggcccaaacgaaagtgcacat
agagtcagaaatagaagacagggaagatcactaaaccatggtagtggtgaacctgtaagg
gaggacacggatgaaggaggaggaggaggaggtgtagggatgcgctggagaggaagagca
gcagactcaggcagaggaagaggagcagcagattcaggcagaggaagaggagacgcaggc
agaagaagaggagaggcaggcagaggaagaggagatgcaggcagaggaagaggagagtca
ggcagaggaagaggagacggaggaagaggagagtcaggcagaggagacgcaggcagagga
agaggagcaacacatgcatcgagaggggagagaaaagatttgggtgcaagaccaaaagta
ggagggagggggataggaggagacaaaggacaagggtgggagtcagaagttggtgtaagg
agagaagaccatagtgcggatggtagaaggggtgagagaagagatggtgcgagaggtaga
caagaacataatggagggagatcgaaatccacaggtagagttggggcacaccatggtcat
ggactgagctataaaacactggaagagctctccgaaaaagatccctctgtagtagcgatc
accctgtcttctaaacctgtcctgcgagaactcctgggtgggacaacaatgagaaatgac
cttgttggactcctctgcctggtgctgagtaaagccttcgaatcccgagcggagagaggc
actctgcagcacctggctggcatcatcaaagagtccgatttcttctccaccgtcctgcca
cgctatctggtgggcatgagctcagagttcaaccccatccgcagggcacaatacccacag
gacctgaaaaacatcctggctattctgtcagaggtcatcaacacctttcctgctagctcg
gtaaattctgtgactttgctactgacgcttatcccagcatccgtctgcagcctgaggaca
tcaggagtagatatccagcctgaaattgaggagagagtggaaagtattcagggcctcatc
aagcacttacaagagaaatcgagggatgggaccctgcgctcagacagggaccattacgcc
ctcctacccactgcaggtgaagaagaccagcaagacttcaggaccatatccatctaccca
actcctgaggagttccatcaggaagaaaggcccttcctcagacccaacctcacctctcag
cgctacgcaagcactcacctctacctcgacacacatttccgcctgctgagagaggacttt
gtgaggccacttcgtgagggggtccagcacttgcttcggagcaaaatggagaagggtgat
aaaccactgaagacaaaacgctttgatgacatcagaatatatttcgacacaaaactggtg
gtgcccaaatgcacaaataatggcattgcctacattgtccagtttgacattcagccactt
aagtttgtgcgctgggagaactcaaagaggctgatctttggctccctggtctgcctgtcg
tgtgatgattttgagagcttcttgttagccaccgtgtcagatcgggatcccaaagaactg
gcaaaggggcaggtccagattgcctttactgcagagagcaggttcaagttggcggaaatg
gagaaagatcagttgttcctgatgattgagaccactgcctactttgaggcctatcgatat
gttctagagggcctacaggagcagaatgaggacaagctgccctttcagaggtacatcgtg
gagtgtaacaaagatgtgttccgcccagcttacctgcaattagaagatgtttatgacctg
tcggacgttgctctgcctcaacacaagaggagtctaaagccatttgtcagcctgaatcca
caggcctggcctcaaatgacgaagctggggctggatgactctcagatgaaagccttccag
ctggccctcacaaaggagctcaccatcatacagggacctcctggcactggaaaaacccat
gttggactcaagattgctcgagctctgttggccaataggaaactgtggagtgatggattg
gacaggactccgatgctggtggtgtgttacactaaccatgccctggatcagttcctcgaa
ggcattcatacatttctgccaaaggggatagtgagagtgggaggccgcagcaacagtgag
atcctgaagcaattcaatctaagggagctgacccgctcacctgacttcagacattcgctt
ccgtctcacctgcgttttgcatttaatgaggtttacaaggagctgtgtcagcaggagagg
gatatccagagtgagagtatgaagctggagtgttccctgaaaggcgtcctacgtgaagac
ttcctacaggagttcatttcagacattcactgggacagtctgcgcgagcaacctacacag
gatggtttcttgatctggggtgagaagaagaagcccagtcagatgatggagtggttgggg
ttgggttccactgtcttcctgcagagggagacagagaatgcaaatggaaatgaagcagca
gatgaagagatggagctggatgacggagacgatttactttatataccagaggaagcagat
ctgatccaggcggagcggattgttgaagacaacattggtcccagaggtggaagagatggc
aaaaagaaagacgaaatggcagagactttaagagcattagaggatctgatgctggctatg
aacctggaggaaactgaaatacaggctgagcagagcgaggcaggatgggagatgcaacgg
gcccagaagaaaaagctgaagcacaaaatcatgagagagctgaggaatagctcggccatg
actgcagaagaggaaaaagctgtcttggatatttggacccttagccggccagacagatgg
agactctatcggttgtggatggctcgctacagggtagcactttccaccagagcacttcgg
tctgaacaggcctatcagaacgcagtggacagattggctgatataaaacgtgaagagaac
gtccatctcctcaagggagccacggtcattggcatgacaacaacaggagcagccaagttc
cgcaaagttctgcagaaagtgcgtccccgactggtgatcgtagaggaggctgcagaggtg
ttggaggcccacaccatcaccaccctgagcgaagcatgccaacacctcatcctcatcggt
gaccaccagcagctgcgccccagtgccacagtatacgaacttgcaaggaaccacaacctg
gagatgtccatgtttgaaaggctggtgaaaatgggacttccttatgtcagacttgactat
cagcaccgtatgaggccagaaattgcccgtcttctgaccccacatatctacgaagagctg
gaaaaccatccctctgtgtttgactacgaaaacatcaagggcctgagtaccaatctgttc
tttgtggagcacaactacagagaacaggagatccaagatgggaaaagccatcagaaccaa
catgaggctaatttcgtagtcgctctttgccgctatcttattcttcaggactacgaacca
gaaaagattactatcctcacaacttacaccggacagctgcactgcctgcgcaacctcatg
cctgccaaagagttcacaggggtcaaagtgcacgtcgttgacaagtaccaaggagaagag
aatgacattgtcttgttgtctctggttcgcagcaacctgcagggcaaggttggctttttg
aacattcccaatcgcgtctgtgtagccctgtctcgtgccaagaaagggctctactgtatt
ggcaacagtgaaatgctgggcaaagtccaactctggagcaacatcttccacacattgagg
cagagcgaccagattggggatgctttgaccctgtactgtcagaatcatccagatcgacag
gtcaaagcgtcttgtgctgatgatttcaaacaagcccctgagggaggctgcaaaaagcct
tgcgagttccgtttggtttgtggccatgtttgcacaagggtttgccatccatacgacccg
gagcacaagaagtacgagtgtcataagaagtgccagaaaactatgtgtgatctgggacac
aggtgcccacttgactgctataaagaatgcccagagaaatgtatagtgaaggtggagaag
atcataccccggtgtcaacacacacagatggttccttgccaccaggacccggagacattt
gtatgccaggagccttgcaaaaagctgctcgactgtgaacatccatgtgtttcgttctgt
ggagaaccatgcacaagttattgcaaacaggaggtcaccttaacactgaagtgcggccac
agccagcaaggtgaatgcttttacaatgacagcaaagacaagcctcaatgtaggacccct
tgtgtggagcagctaaaatgcggccatgcctgtaagggtaactgtggcaagtgtaatcag
ggacggttccattactcatgttctcaaaagtgtgatcggctcctgatttgctctcacaag
tgcatggagccctgcacaagtgattgccccccctgtctgaaaccatgtgagaattgctgc
gtgcacagcaagtgtatgaagccatgtggacagccctgtgctccgtgcattgagccctgt
gcctggcagtgccctcacctaagctgcagtaagctttgccatgagccatgcgaccgtctg
ccatgcaaccaaccctgtgccagcaccctggattgcggccacccttgcataggtctgtgt
ggagacaaatgtccaagcaaatgtcgcatctgtcatcacgatgtggtcacagagattttc
ttcggcactgaggatgagcctgacgcttacttcattcagctagaagactgtggacacatt
gttgaatacacagccatggaccagtacatggagatggatgacaaacagcaggcaaatgaa
gctgagcaggtggccataaaactgaaggaatgtcccaggtgtcgaacatcgattcgcaag
aatctacgctatggatctcacatcaaccgctgtctcgctgaaatagagatggtcaaagta
aagataaacggacgtcgggtggacattaaagagcacagacaggcccttcaaaatcagtgg
gaaggcaaccttcttcaatatgaaatgcatgaccatgtggaatacatggctgttaaactg
gtacaaccttatctcacagcaaaggatctgtgggtgctggaaaacaagatggatttccta
atcagaattgcaaagctgaagaagatccaaaagggaaatatgtcggaattgaacagcgag
acattaggagagtattttgtggagtttgtgcgctggctcaataactggcgccaaaaattc
tcagaccagcaggtctttgatttgcagagagagctacagaggctcaccttcctgactgaa
ctcaacgcccgttgccacaaggcagacataagaaaactaactgacaaaataaattccgag
atacaaacaataagagaggttttggaaaggattggtccattcactgagcaagatcaagac
agagtgaaagaagccatggaggagctagacagcaaacttcctccctcaggcttggggatc
agtgaggaagagagaaagatgatcgtctctgctatgaaaatagcgcctggacactggtac
aaatgtcctaatggccatgtctatgtcataactgagtgtggaggggctgtggagagtcga
cgctgcgcggattgtgcagccactattggtggggaaaatcacgcactggcaggtggcaac
caagtcgcctcagagatggatggggcacagcaccctgcttggtctgaagcaaacaacctt
ctcaactttgatcaagttgacttctga
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integrated database retrieval system
