Trematomus bernacchii (emerald rockcod): 117489527
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Entry
117489527 CDS
T09643
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117489527 (cpne1)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117489527 (cpne1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117489527
NCBI-ProteinID:
XP_033994757
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAGETAAPTAGHAHRQAGTTPIPTVQ
QGTGGRSSSHGNQGFGNNPASVTAASSSHEPQSHKSVISVLPSFPNSYSSAPTITSALAS
LNACPPPIPPLPSMPSMPPMPTLPTMPVPPPVSSLPPMPTISPLSQGPPVPPMSHLSHMS
SMPPFNPSLPPPGGMGSGLPLGAPNPMLFNPLSPLASLGLQAHMKAAAAAAAAGAGVAHP
DELFIQLHNLPFTCSEMEVREFFRGLGVDGVRLLRDGQGRPTGRAMVKFFSPQDSFEAVK
RGGGMMGQRFIEITPGSERQWASLNDSMMGHVPHNSSKSMNSNESQDQHQRRGNAGAGGR
DQRARSRSPHRQEFCVYLKGLPYEADKKQIKEFFNNLSVLEDSVYIAYGPNGRATGEGFL
EFKTEQDYKTALGSHMQYMGTRFIQVHPINRKGMLEKIDSIRKREASQGDGKNQDGSKVP
RNCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKGE
RLHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQTQPNQNLNQNQHQQSQPSPQ
QPQINPFAGISGEEFNFLRNTMGNLNNAPFVSPFSAPGNGLAGPPPLPPLAAGLGDVNMG
MAPPLIAGLPGAPIMEPPGFRPGVAGGASFNQDGLRGLVPFDNVNRKAGGGGQNRGGGAN
NNQGRPGGGATGGPQAFSPGAEGHRNQPAPGGSSNPNGQRGAPGPTIVKLQNMPFTVTVD
EIMDFFYGYQVLQGSVCLQFSEKGLPTGEAMVAFQNHEEASAAVMDLNDRPIGARKVKIS
LG
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatcaggctacagggtctgcctatagtggctggcaccatggacatcaga
cacttcttctctggcctaaccatccctgacgggggagttcacattgttgggggtgagcat
ggcgaagccttcattgtctttgcaactgatgaggacgctcggctgggcatgatgcgtaca
ggtggggctattaagggctcaaaagtgtccctgttgcttagcagcaagacagagatgcag
aacatgattgaactcagccgccgcagatttgaggctggggcaggtgctggggagacagct
gcaccaactgcaggacatgctcaccgacaagcaggcacaacccccatacctacagtgcaa
caagggaccggggggagaagcagtagccatggaaaccaaggtttcggtaacaacccagct
tcagtgacagcagcaagctcatctcatgagccgcagagccacaagtcggttattagtgtt
cttcccagcttccctaacagctacagctctgccccaaccatcacctcagctctggcatca
ctcaatgcatgcccaccacccatccctccacttcccagcatgccttccatgccccccatg
ccaacgctgcccacaatgccagttcctcctccagtgtcttcccttccccctatgcccact
atctcccccctgtcccaaggacctccagtgcctcctatgtcccatctctcccacatgtcc
tccatgcctcccttcaacccctcactccctcccccaggaggaatgggctccggcctccct
cttggtgccccaaacccaatgctgttcaaccctctctcccctctagcctctctgggcctc
caggcacacatgaaggctgctgctgctgcagcagcagctggagccggagtggcccaccca
gatgagttgtttatccaactgcacaatctcccattcacctgctcagagatggaggttagg
gaatttttccggggtctgggggtggatggggttcgtctgctgagggatgggcagggtcgg
ccaactggcagggctatggtcaagttcttctcaccccaggacagctttgaagctgtcaaa
cgaggaggtggcatgatgggccaacggtttattgagataaccccaggctctgagcggcaa
tgggccagtctcaatgacagcatgatgggccatgttccccacaatagcagcaaatcaatg
aacagcaacgagtcacaggaccagcatcaacggcgtggcaatgctggtgcaggaggtaga
gatcagcgagcaaggtcacgatctccacatcggcaggagttttgtgtctacctgaaaggc
cttccctatgaggccgacaagaaacagattaaggaattcttcaataatctgtccgtcctg
gaggacagtgtctacattgcctacgggcctaatggacgagccacaggagaaggcttcctt
gagttcaaaaccgaacaagactacaaaactgctctgggctctcatatgcagtacatgggc
actcgctttatccaggtccacccaatcaaccgtaagggaatgcttgaaaagatagacagc
attcgcaaacgtgaagcatcacagggcgatggcaagaaccaggacggttcaaaagttccc
aggaactgtgcccacatcaccaacatcccttacaatgtctccaagaaggatgtccgtgcc
ttcctggagggtgtagggctgtacgaggacaccctaaaggtattgacagatagccatggt
aatggtttaggtcaagcaatcttccagctgcgcacagaggaagatgcccgaaaaggtgaa
agactccaccgccaaaaactcaacggtcgcgatgcatttgtccacctggtaacctttgag
cagatgaaggaaattgagaggaacccccctccccagaataagaggggacaacgcaaccag
acccagccgaaccaaaatctaaatcagaaccagcaccagcagtcccagccttctccccag
caaccccagataaacccatttgcggggattagcggggaggagtttaactttctcagaaac
accatggggaacctaaacaatgccccctttgtgagtccattctcagccccagggaacggg
ctggcaggccctcctcctctaccaccccttgcagcagggttgggagatgtaaatatgggg
atggctcctccactaattgctggtcttcctggagctccgatcatggagccaccaggcttt
cgacccggagtagcaggaggcgcttctttcaaccaagatgggctaagagggttagtgccc
tttgacaatgtcaacagaaaagcaggtggaggtggtcagaatagaggggggggggctaac
aacaatcaaggacgtccagggggtggggctactggtgggccgcaggcgttcagtccagga
gctgaaggtcaccgtaaccagccggcccctggaggatctagcaatcccaacggtcaacga
ggtgcccctggcccgacaattgtaaagcttcagaatatgccattcactgttaccgtagac
gagatcatggacttcttttatggctaccaggtgctacaaggctcagtctgcctgcagttc
agtgagaaaggtctgccaactggcgaggccatggttgcctttcaaaaccatgaggaggcc
tctgccgctgtcatggacctcaatgaccgacctattggagcacgcaaagtcaagataagc
cttggttaa
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