Trematomus bernacchii (emerald rockcod): 117489566
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Entry
117489566 CDS
T09643
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03320
PPAR signaling pathway
tben04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117489566 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117489566 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117489566 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117489566 (pparg)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117489566 (pparg)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117489566 (pparg)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
117489566
NCBI-ProteinID:
XP_033994835
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MQTPGRDLNDQSGHNFSADMVDTQQLLSWPVSFSLSAVDLSELDDSSHSLDMKHLSTLDY
ASISSSSIQSSLSPPLVSSISSAGGAYDPSPPQHEELLTNMDYTNMHSYRMEADTHNLIK
LEPESPPQYSDIPVFSKLTDETSASALNIECRVCGDKASGFHYGVHACEGCKGFFRRTIR
LKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLNVGMSHNAIRFGRMPQAEKEKLLAEFSSD
MVHMHPEAADLRALARHLYEAYLKNFPLTKAKARAILSGKTGDNAPFVIHDMKSLMEGEQ
FINCRQIPLKEHHHHHQQQQTSALTAGLGGAHQGSEYGFLGMTSISEEGPQDALELRFFH
SCQSRSAEAVREITEFAKSIPGFSELDLNDQVTLLKYGVIEVLIIMMAPLMNKDGTLISY
GQIFMTREFLKSLRKPFSQMMEPKFEFSVKFNMLELDDSEMALFLAVIILSGDRPGLLNV
KPIEQLQETVLHSLELQLKLNHPISLQLFAKLLQKMTDLRQIVTDHVHLIQLLKKTEVDM
CLHPLLQEIMKDLY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccaggcagagatttaaacgatcaaagcggtcacaacttctcagcagacatg
gtggacacgcagcaactcctctcctggcctgttagtttcagtctgagcgccgtggacctg
tcagagctggacgacagctcccactcccttgacatgaagcatttgtccacgttagactac
gcctccatctcctcctcctccatccagtcctccctgtctcccccgctcgtatcctccatc
tcctctgccggtggggcctatgaccccagcccgccgcaacacgaagaactactgaccaac
atggactacacaaacatgcacagctacaggatggaggctgacacgcacaatttgataaag
cttgagccggagtcgccgccgcagtactccgacattcccgtgttctccaagctcacggac
gaaacgtcggcgtcagcgctaaacatcgagtgtcgtgtgtgtggagacaaagcttcgggg
tttcactatggcgtccacgcctgtgagggctgtaagggtttcttcagacggactatcagg
ttaaagttggtgtacgatcattgtgatcttcactgtcgcattcacaagaagtcccgcaac
aaatgccaatactgtcgcttccagaagtgcctcaatgtcggcatgtcacacaacgccatt
cgctttggccggatgcctcaggcggagaaggagaaacttctagctgagttctcctctgac
atggtgcacatgcacccggaggcggctgatcttagggctctggcccggcatctgtacgag
gcctatctgaaaaacttccccctcaccaaggccaaggccagggccatcctctctggaaag
accggagacaacgcgccttttgtcatccatgacatgaagtctctaatggaaggagaacag
tttattaattgtaggcagatccccttaaaggaacaccaccaccaccaccagcagcagcag
acctccgccctaacagctggacttggaggagctcaccaggggtcagagtatggctttctt
ggaatgacgagcatcagcgaagagggaccccaagacgctttggagctgcgttttttccac
agctgtcagtcacgttcggccgaagcagtgagagaaattacggagtttgcaaagagtatc
ccagggttcagcgaactggacctcaatgatcaggtaactttgctgaagtacggtgtcatt
gaggtcctaatcatcatgatggcgcctctgatgaacaaagacgggaccttgatctcctac
ggacagatcttcatgacgcgggagttcctcaagagcctcaggaaacctttcagtcaaatg
atggagcccaagtttgagttctcagtcaagttcaacatgctggagctggacgacagcgaa
atggcgctgtttctggctgtcatcatcctcagcggggaccgcccgggcctgctgaacgtg
aagcccatcgagcagcttcaggagacggtgctccactctctggagctgcagctgaagctg
aaccaccccatctctctgcagctgttcgccaagctgctgcagaagatgaccgacctgcgt
cagatcgtcaccgaccacgtgcacctcatacagctgctgaagaagacggaggtggacatg
tgcttacaccctctgctgcaggagatcatgaaggacttgtattag
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