Trematomus bernacchii (emerald rockcod): 117489595
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Entry
117489595 CDS
T09643
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117489595 (arhgef10la)
03036 Chromosome and associated proteins [BR:
tben03036
]
117489595 (arhgef10la)
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117489595 (arhgef10la)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117489595 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
SOS1_NGEF_PH
Beta-prop_RSE1_2nd
CFAP43_N
IQ_SEC7_PH
RHG20_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
117489595
NCBI-ProteinID:
XP_033994926
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MSTVMPQQQPPKEEEEDEDEEQGEGFSFEDSGDEEKPQGDSKGIPSDSVGSVQSSKKEDS
ETSGSSSLTGTDCTQLPITSPPAGQEEILTKDVDSNSTADVPVKESPSGVSAAEPCSSAP
LVGDELPGLPAAPPAVETTTDSGDQGEEIEKSSSEALLAAEAEPEAPEVIYDDVPSEGPL
SPDEDMIYEDVQRDSRPLDRDNGWSSSEFESYDEQSDNETKLPTRSKLSPDVSRLRERCA
RTKRELAMRLSGKHNYDIKVQQLMKAARSGTKDGLEKTKIAVMRKVNFLQRKDQPGNAEE
EDDAGYLDVAVPDVKHPPPQLSPMPEGLTSHQVVRRHILSSIIQSEHSYLESLRRIVQEY
QRPLMEADPRILSSRKIRPIFFRMREITQCHSMFQIALASRVAEWDSCEKIGDLFVASFS
KSMVLDVYSDYVNNFTNAMALIKKACLSKPAFLEFLKKKQACSVDRITLYGLMVKPIQRF
PQFILLLQDMLKNTPKGHVDRLPLQLALTELEMLAEKLNEQKRVADQIAETQQLARSVSD
RLLSKQLNSEQGSLVLCETLIETVYGERGQVLKSKERKVFLFDDVLICANINVKGPPDIS
SLVPVGPKYTMKWSATLQQVQVVEVGQEGSQSKDTFFQQSGAKRPGGACTSGKAILGPPR
LYQELQELQHDLSVVEEVTLLVGTLQGMYQNLNTTVAQDWCLALQRLIRIKEEQIQSANK
CRLRLQVPGRPDKSGRPVSFMVVLNTPNPLSKISWVNRLHLAKIAQRAENSPGWLCGEDE
GKTMAPFSCPLLACHMPVFATKSPERKLEAALHNPVQCALLGFSAASTSLPQGYFWVAGG
EGSHGQIEIFSLNRPMPRTVKSLQVDSAARCLEYVPEPSPTEETDAGVQKAPTGIGANIC
VGLDDGRILVYGSVDTTAQCLLTLHNPEGCPVLCLKHSSRFLFAGLRNGTMMVYGRNKND
DCWDQDSCRCVRVGSEPVRTLLVLDDSVWASCGNSVTAVDSTSLNTQTFEVHPDKMISVA
HMACAGGGVWMAFSEGSSIRLFHTETLELLQEINISTRSTLLNTGQKNMRVTSLLICQGL
LWVGTAQGLIITLPVPKLEGIPKITGKGMVSLNAHCGPVEFLVATTSSLSPDLLKRDSFG
DGPDSAFGGEERSDTSSQESLQQSYQGEGRGKGRGVLLQYKLRSTSGLPGRPLTAMGDEA
SDSSLESLEHSVEDGSIYELSDDPDMWVRGRPCEREGGRRDRVISAAVISGGKGFRRLKE
GAAAGTRTSGEVLENNLMVWQLPLTV
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgtgatgcctcaacagcaaccgccaaaggaggaggaagaggacgaagatgaa
gagcaaggggaagggttttcatttgaggacagtggggatgaggagaaacctcagggggac
agtaagggcatcccctctgactctgttggatcagtccagtcatcaaaaaaggaggacagt
gaaacatcaggaagttcatcactaacaggcacagactgcacacaacttcctataacgtcg
cctcctgctggacaggaggagatcctcaccaaggatgtagattcaaattctactgcagat
gttccagtcaaagagtcacccagcggggtctcagcagcagagccctgttcctcggctcct
ctggtgggagacgagctccctgggcttcctgcggcgccgccagctgtggagacgacgact
gattcaggagaccaaggcgaagaaatcgagaaaagctccagtgaagctctactcgcggct
gaagctgagccagaggctcccgaggtgatctatgatgatgttccaagtgaaggccccctc
tctcctgatgaagatatgatctacgaagatgttcagagagacagccgtcctctggataga
gacaacggatggagctccagtgagtttgaaagctatgatgagcagtctgataacgagacc
aaattaccaacacgaagcaagctctctcctgacgtgagtcggctgagggaacgctgtgcc
aggaccaaacgagagctggccatgagactctctggcaagcacaactatgacatcaaggtt
cagcaactcatgaaggcggccagaagcggaacgaaggacgggcttgaaaagaccaagata
gccgtcatgcgaaaagtgaacttcctgcagagaaaggatcaaccgggtaatgcggaggag
gaagatgatgcaggatacctggatgtggccgtgccagacgttaagcatcctcccccacag
ctgagcccaatgcccgaggggctcaccagccaccaggttgtcagacgccatatcctgagc
tccatcatccagagcgagcacagctacctggagtctctccggaggatcgtgcaggaatac
cagagaccgttgatggaagccgatccacgcatcctgagctcgagaaagatccggcctata
tttttcagaatgagggagatcacacagtgccactccatgtttcagattgctctggcgtca
cgtgtcgccgagtgggacagctgtgagaaaatcggggacttatttgttgcctcgttttcc
aagtccatggtgcttgacgtatacagtgattacgtgaacaacttcaccaacgccatggct
ctcattaaaaaggcctgcttgtccaaaccggcttttcttgaattcttaaagaagaagcag
gcatgcagtgttgaccggatcactctgtatggactcatggttaaacccattcagcgcttc
cctcagttcatactgctactgcaggacatgctgaagaacactccgaagggccacgtggac
cgcctgcccctgcagctcgctctcacagagctggagatgctggcggagaagctgaatgaa
cagaaacgagtcgccgaccagattgcagagactcaacaactagcccgcagcgtcagtgat
cgcctgctcagtaagcaactgaactctgagcaggggtcactggtcctttgtgagacgctc
atcgagactgtgtacggcgagcggggacaagtcctgaagtcgaaggagagaaaggtcttc
ctctttgatgatgtgctcatctgcgccaacataaatgtcaaggggcccccagatatcagc
agcttggtcccagtggggcccaagtacaccatgaagtggagcgccaccctgcagcaggtg
caggtggtggaggtggggcaggagggctctcaaagcaaagacaccttcttccagcagagc
ggggccaagcgtccaggtggagcctgcacttcaggtaaagcgatccttggccctccgcgg
ctctaccaggagctgcaggagctgcagcacgacctctctgtggtggaggaggtcaccctg
ctggtgggcacgctgcaggggatgtaccagaacctgaacaccactgtggcacaggactgg
tgtctggctctacagaggcttattcgcatcaaagaggaacagatccagagcgctaacaaa
tgtcgcttacgcctgcaggtacccggcaggccagacaagtcagggcgtcctgtcagtttc
atggtggtcctcaatactccaaacccccttagtaagatctcctgggtcaaccgtctgcac
ttggccaagattgcacaacgagcagagaattcaccaggctggttgtgtggagaggacgag
gggaagacgatggccccgttttcatgtccgctgcttgcctgtcacatgcctgtgtttgct
acaaagtcaccagagagaaagctggaagctgccctccacaatcctgttcagtgcgcgttg
ttgggcttctctgcagcgagcacctccttacctcaaggctacttctgggtggctggtgga
gaaggctcgcatggccagattgagatattttccctcaacaggcccatgccaaggactgtg
aaaagcctgcaggtagactcagccgcccgatgtctggaatatgtgccagaaccttctccg
actgaggaaactgatgcaggagttcaaaaggccccgacagggatcggtgccaacatttgt
gtcggattagacgatgggcgcatacttgtttacggcagtgtggacactacagcacaatgc
ctgctgaccctccacaacccagagggctgccctgtgctgtgcctgaagcactcctctcgc
ttcctgtttgcaggcctccggaacggcaccatgatggtttatggaagaaataaaaacgat
gattgttgggaccaggactcctgcaggtgtgtgagagtgggctcagaaccggtgcggacc
ctgctggtgttggacgactcggtgtgggcgagctgtgggaactctgtcacagccgttgac
agcaccagcctcaacactcagacgtttgaagtgcacccagacaaaatgatcagcgtggct
cacatggcgtgtgccggtggaggggtgtggatggcattctccgagggttcttccattcgt
ctctttcatactgaaacactggagcttctgcaggaaatcaacatctccacacgctcaacg
ctgctgaacaccggtcaaaagaacatgcgagtgacgagtctgctaatttgccaggggctg
ctctgggtgggcactgcccaaggcctcattatcactcttccagtccccaaactggagggc
atccccaaaataacaggaaagggaatggtctctctgaatgcacattgtgggcctgttgag
ttcctggtggccaccaccagctctctgtcccctgacctcctgaagagagactctttcggg
gacgggccggactctgcgtttggcggcgaggagcgcagcgacacctcgtcccaggagtcc
ctgcagcagtcctaccagggggaggggcggggcaaaggccgcggcgtcctgctgcagtac
aagctgcgctccacatcgggactgcccgggcgcccgctgacagcgatgggcgacgaggcg
tcagactcctccctggagtccttggagcacagcgtggaagacgggtccatctacgagctc
agcgacgacccagacatgtgggtccggggacgtccttgtgagcgggaggggggccgcagg
gacagggtgatctctgcggcggtcatctctggaggaaagggcttccgtagactgaaggaa
ggagcggcagccggcacgaggacgagcggggaggtcttagagaataatctgatggtgtgg
cagctccctctgacagtgtga
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